RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	PLA2G4B	P0C869	781 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	SLC12A3	P55017	1021 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	XKR4	Q5GH76	650 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	CD300LG	Q6UXG3	332 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	ALKAL1	Q6UXT8	129 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	UROC1	Q96N76	676 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	PHOX2B	Q99453	314 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	GOLGA2P5	Q9HBQ8	144 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	TOPORS	Q9NS56	1045 aa	Predicted RBP	27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	FBXW11	Q9UKB1	542 aa		27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	MORC2	Q9Y6X9	1032 aa	Predicted RBP	27.69	■■■□□ 2.02
TCF3-210	ENST00000587235	FGFR3	P22607	806 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	UPP1	Q16831	310 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	SPIRE2	Q8WWL2	714 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	RSAD2	Q8WXG1	361 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	ACAP3	Q96P50	834 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	MFSD1	Q9H3U5	465 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	EPS15L1	Q9UBC2	864 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	DUSP12	Q9UNI6	340 aa		27.68	■■■□□ 2.02
TCF3-210	ENST00000587235	MCF2	P10911	925 aa		27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	PLS3	P13797	630 aa		27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	PROZ	P22891	400 aa		27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	NUBP1	P53384	320 aa		27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	PTPA	Q15257	358 aa		27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	MPZL3	Q6UWV2	235 aa		27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	ZBTB45	Q96K62	511 aa	Predicted RBP	27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	27.67	■■■□□ 2.02	1e-6	■■■□□ 18.3
TCF3-210	ENST00000587235	CLIC4	Q9Y696	253 aa		27.67	■■■□□ 2.02
TCF3-210	ENST00000587235	MYH11	P35749	1972 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	ABLIM1	O14639	778 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	TRAPPC3	O43617	180 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	OR1D2	P34982	312 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	SMTN	P53814	917 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	SOX4	Q06945	474 aa	Predicted RBP	27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	STRN3	Q13033	797 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	RAB33A	Q14088	237 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	LIN9	Q5TKA1	542 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	ASTL	Q6HA08	431 aa	Predicted RBP	27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	TMEM105	Q8N8V8	129 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	C3orf58	Q8NDZ4	430 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	ZMAT2	Q96NC0	199 aa	Known RBP	27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	CCSER1	Q9C0I3	900 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	FOXD4L1	Q9NU39	408 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	SLC38A7	Q9NVC3	462 aa		27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	SRPRB	Q9Y5M8	271 aa	Known RBP	27.66	■■■□□ 2.02
TCF3-210	ENST00000587235	VWA8	A3KMH1	1905 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	HNRNPA1	P09651	372 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	HARS	P12081	509 aa	Known RBP	27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	LAMP2	P13473	410 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	SCP2	P22307	547 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	BRCC3	P46736	316 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	PPM1L	Q5SGD2	360 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	GET4	Q7L5D6	327 aa	Predicted RBP	27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	TMEM161B	Q8NDZ6	487 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	DDX27	Q96GQ7	796 aa	Known RBP	27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	SNX27	Q96L92	541 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	MTRR	Q9UBK8	725 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	FBXL21	Q9UKT6	434 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	CACNA1H	O95180	2353 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	DOCK6	Q96HP0	2047 aa		27.65	■■■□□ 2.02
TCF3-210	ENST00000587235	DOCK8	Q8NF50	2099 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	NPHP3-ACAD11	A0A0J9YXS1	232 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235		H0YCG3	227 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235		I3L4J1	428 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	NARS	O43776	548 aa	Known RBP	27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	C8A	P07357	584 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	KCNE1	P15382	129 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	TKT	P29401	623 aa	Known RBP	27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	CLCN5	P51795	746 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	RSPO2	Q6UXX9	243 aa	Predicted RBP	27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	GRASP	Q7Z6J2	395 aa	Predicted RBP	27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	SLC44A3	Q8N4M1	653 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	FLCN	Q8NFG4	579 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	RASSF8	Q8NHQ8	419 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	NXPE3	Q969Y0	559 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	IRF2BPL	Q9H1B7	796 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	LARS	Q9P2J5	1176 aa	Known RBP	27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	ODF2L	Q9ULJ1	636 aa		27.64	■■■□□ 2.02
TCF3-210	ENST00000587235	GALR2	O43603	387 aa	Predicted RBP	27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	TOM1L1	O75674	476 aa		27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	HSP90AA1	P07900	732 aa	Known RBP	27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	MAPT	P10636	758 aa	Known RBP	27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	FSHR	P23945	695 aa		27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	ARSH	Q5FYA8	562 aa		27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	BACE2	Q9Y5Z0	518 aa		27.63	■■■□□ 2.01
TCF3-210	ENST00000587235	CDY1	Q9Y6F8	540 aa		27.63	■■■□□ 2.01
TCF3-210	ENST00000587235		H0Y858	1186 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	CCL16	O15467	120 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	HOXA9	P31269	272 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	NTHL1	P78549	312 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	CACNB1	Q02641	598 aa	Predicted RBP	27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	GRIN1	Q05586	938 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	UVSSA	Q2YD98	709 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	ANKS3	Q6ZW76	656 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	ATOH1	Q92858	354 aa	Predicted RBP	27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	KCNN1	Q92952	543 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	FAM86C1	Q9NVL1	165 aa		27.62	■■■□□ 2.01
TCF3-210	ENST00000587235	CNTN3	Q9P232	1028 aa		27.62	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms