RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 FAM212AQ96EL1 285 aa20.8■□□□□ 0.92
DDX39A-204ENST00000586558 KIF12Q96FN5 646 aa20.8■□□□□ 0.92
DDX39A-204ENST00000586558 SPG21Q9NZD8 308 aa20.8■□□□□ 0.92
DDX39A-204ENST00000586558 DACH1Q9UI36 760 aa20.8■□□□□ 0.92
DDX39A-204ENST00000586558 UBQLN1Q9UMX0 589 aaKnown RBP20.8■□□□□ 0.92
DDX39A-204ENST00000586558 FRMD4BQ9Y2L6 1034 aa20.8■□□□□ 0.92
DDX39A-204ENST00000586558 MAPK13O15264 365 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 SLC11A1P49279 550 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 NLRP12P59046 1061 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 PAK1Q13153 545 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 TMEM132DQ14C87 1099 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 ZBTB6Q15916 424 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 KLHL10Q6JEL2 608 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 SLC39A11Q8N1S5 342 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 NELFBQ8WX92 580 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 DDX27Q96GQ7 796 aaKnown RBP20.79■□□□□ 0.92
DDX39A-204ENST00000586558 STK39Q9UEW8 545 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 FAN1Q9Y2M0 1017 aa20.79■□□□□ 0.92
DDX39A-204ENST00000586558 CITO14578 2027 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 H3BNC9 293 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 CETN3O15182 167 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 RPL9P32969 192 aaKnown RBP20.78■□□□□ 0.92
DDX39A-204ENST00000586558 OR1G1P47890 313 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 FKBP3Q00688 224 aaKnown RBP20.78■□□□□ 0.92
DDX39A-204ENST00000586558 UBE3AQ05086 875 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 CYP24A1Q07973 514 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 ADAM9Q13443 819 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 PSMD6Q15008 389 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 CT47A1Q5JQC4 288 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-204ENST00000586558 ANKRD40Q6AI12 368 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 JADE1Q6IE81 842 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 SASS6Q6UVJ0 657 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 ZC3H3Q8IXZ2 948 aaKnown RBP20.78■□□□□ 0.92
DDX39A-204ENST00000586558 BEST2Q8NFU1 509 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 MFSD14AQ96MC6 490 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 MKNK1Q9BUB5 465 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 COLEC11Q9BWP8 271 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 CERS4Q9HA82 394 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 CTNND2Q9UQB3 1225 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 LZTS1Q9Y250 596 aa20.78■□□□□ 0.92
DDX39A-204ENST00000586558 NRP1O14786 923 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 FGF18O76093 207 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 LETM1O95202 739 aaPredicted RBP20.77■□□□□ 0.92
DDX39A-204ENST00000586558 NFICP08651 508 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 PSMC2P35998 433 aaKnown RBP20.77■□□□□ 0.92
DDX39A-204ENST00000586558 PBX3P40426 434 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 PMS1P54277 932 aaKnown RBP20.77■□□□□ 0.92
DDX39A-204ENST00000586558 PLCB3Q01970 1234 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 KRT17Q04695 432 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 DPCR1Q3MIW9 517 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 SPATA1Q5VX52 437 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 CEP135Q66GS9 1140 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 TTI2Q6NXR4 508 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 USP37Q86T82 979 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 KLHL23Q8NBE8 558 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 RDH13Q8NBN7 331 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 C18orf25Q96B23 403 aaPredicted RBP20.77■□□□□ 0.92
DDX39A-204ENST00000586558 TMEM169Q96HH4 297 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 IGSF21Q96ID5 467 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 PDE11AQ9HCR9 933 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 RWDD2AQ9UIY3 292 aa20.77■□□□□ 0.92
DDX39A-204ENST00000586558 CASTOR2A6NHX0 329 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 TMEM189-UBE2V1I3L0A0 370 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 SLC16A3O15427 465 aaKnown RBP20.76■□□□□ 0.91
DDX39A-204ENST00000586558 CASP4P49662 377 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 SOX4Q06945 474 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-204ENST00000586558 ENPEPQ07075 957 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 SPAG1Q07617 926 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 GPM6BQ13491 265 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 GRIN2CQ14957 1233 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 NFKBIBQ15653 356 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 WDR49Q8IV35 697 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 EFCAB13Q8IY85 973 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 DEFB123Q8N688 67 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 CACTINQ8WUQ7 758 aaKnown RBP20.76■□□□□ 0.91
DDX39A-204ENST00000586558 CEP63Q96MT8 703 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 FNBP1Q96RU3 617 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 LMAN2LQ9H0V9 348 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 ANO10Q9NW15 660 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 TUBGCP4Q9UGJ1 667 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
DDX39A-204ENST00000586558 PRG3Q9Y2Y8 225 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-204ENST00000586558 TDRD15B5MCY1 1934 aaKnown RBP20.76■□□□□ 0.91
DDX39A-204ENST00000586558 KIAA1671Q9BY89 1806 aa20.76■□□□□ 0.91
DDX39A-204ENST00000586558 NLRC5Q86WI3 1866 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 TRIM49BA6NDI0 452 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 EPOPA6NHQ4 379 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 AKAP3O75969 853 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 ITGB1P05556 798 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 ERCC5P28715 1186 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-204ENST00000586558 LRPAP1P30533 357 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 UPP1Q16831 310 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 DCLRE1AQ6PJP8 1040 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 INTS8Q75QN2 995 aaKnown RBP20.75■□□□□ 0.91
DDX39A-204ENST00000586558 FAM186BQ8IYM0 893 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 TMC2Q8TDI7 906 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 PRDM12Q9H4Q4 367 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
DDX39A-204ENST00000586558 NT5C1B-RDH14C9J2C7 533 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 EPB41P11171 864 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms