RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CCNE1P24864 410 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 MATR3P43243 847 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATG4D-205ENST00000586477 KCNC3Q14003 757 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 CLUL1Q15846 466 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 NFIL3Q16649 462 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 CENPPQ6IPU0 288 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 GLB1LQ6UWU2 654 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 MPZL3Q6UWV2 235 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 TAS1R3Q7RTX0 852 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 C12orf56Q8IXR9 622 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 FGFBP2Q9BYJ0 223 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-205ENST00000586477 RSAD1Q9HA92 442 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 KIAA1586Q9HCI6 787 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 MIOSQ9NXC5 875 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 RWDD2AQ9UIY3 292 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 MAPK8IP1Q9UQF2 711 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 USP20Q9Y2K6 914 aa17.54■□□□□ 0.4
ATG4D-205ENST00000586477 PPP1R3GB7ZBB8 358 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 INPPL1O15357 1258 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 ZC3H11AO75152 810 aaKnown RBP eCLIP17.53■□□□□ 0.4
ATG4D-205ENST00000586477 GALTP07902 379 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 MCF2P10911 925 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 PPM1AP35813 382 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 SLC11A1P49279 550 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 ZNF445P59923 1031 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 NOLC1Q14978 699 aaKnown RBP eCLIP17.53■□□□□ 0.4
ATG4D-205ENST00000586477 DUSP6Q16828 381 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
ATG4D-205ENST00000586477 ZNF568Q3ZCX4 644 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 PLPP4Q5VZY2 271 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 KLHL10Q6JEL2 608 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 ARMCX5Q6P1M9 558 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 GLIS3Q8NEA6 775 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 NELFBQ8WX92 580 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 POMGNT1Q8WZA1 660 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 PGBD4Q96DM1 585 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 TARS2Q9BW92 718 aaKnown RBP17.53■□□□□ 0.4
ATG4D-205ENST00000586477 GZF1Q9H116 711 aaPredicted RBP17.53■□□□□ 0.4
ATG4D-205ENST00000586477 KCTD10Q9H3F6 313 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 NXF3Q9H4D5 531 aaKnown RBP17.53■□□□□ 0.4
ATG4D-205ENST00000586477 ANKFY1Q9P2R3 1169 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 STYXL1Q9Y6J8 313 aa17.53■□□□□ 0.4
ATG4D-205ENST00000586477 FKBP3Q00688 224 aaKnown RBP17.52■□□□□ 0.4
ATG4D-205ENST00000586477 POU5F1Q01860 360 aaKnown RBP17.52■□□□□ 0.4
ATG4D-205ENST00000586477 MCL1Q07820 350 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 KCNA1Q09470 495 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 TPD52L1Q16890 204 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-205ENST00000586477 LRSAM1Q6UWE0 723 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 SLC9A9Q8IVB4 645 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 GSTCDQ8NEC7 633 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 RSPH1Q8WYR4 309 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 TCF25Q9BQ70 676 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 BPIFA3Q9BQP9 254 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 PDZD7Q9H5P4 517 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 EPHX3Q9H6B9 360 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 TLE6Q9H808 572 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 AGPAT3Q9NRZ7 376 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 BARX2Q9UMQ3 279 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-205ENST00000586477 CTNND2Q9UQB3 1225 aa17.52■□□□□ 0.4
ATG4D-205ENST00000586477 ZMYM2Q9UBW7 1377 aa17.52■□□□□ 0.39
ATG4D-205ENST00000586477 TRIP11Q15643 1979 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 ARL5CA6NH57 179 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 CETN3O15182 167 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 MBTPS2O43462 519 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 ITGA4P13612 1032 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 PROZP22891 400 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 PDE12Q6L8Q7 609 aaKnown RBP17.51■□□□□ 0.39
ATG4D-205ENST00000586477 USP37Q86T82 979 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 MICAL1Q8TDZ2 1067 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
ATG4D-205ENST00000586477 IGSF21Q96ID5 467 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 ZFP42Q96MM3 310 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 FUCA2Q9BTY2 467 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 MSTO1Q9BUK6 570 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 TSPY26PQ9H489 355 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 PTPRHQ9HD43 1115 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 AGO2Q9UKV8 859 aaKnown RBP17.51■□□□□ 0.39
ATG4D-205ENST00000586477 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 FRMD4BQ9Y2L6 1034 aa17.51■□□□□ 0.39
ATG4D-205ENST00000586477 A0A0B4J269 797 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 C2orf71A6NGG8 1288 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 SMTNL1A8MU46 457 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 OGTO15294 1046 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 TGFB1I1O43294 461 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 NPTXRO95502 500 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 POMCP01189 267 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 NR3C1P04150 777 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 CD44P16070 742 aaKnown RBP17.5■□□□□ 0.39
ATG4D-205ENST00000586477 HOXD13P35453 343 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 MLH1P40692 756 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 ALDH7A1P49419 539 aaKnown RBP17.5■□□□□ 0.39
ATG4D-205ENST00000586477 TPM4P67936 248 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 ANO6Q4KMQ2 910 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 ZCWPW2Q504Y3 356 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 EEF1DP3Q658K8 133 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 XXYLT1Q8NBI6 393 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 AUTS2Q8WXX7 1259 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 PPP2R3CQ969Q6 453 aa17.5■□□□□ 0.39
ATG4D-205ENST00000586477 CEP63Q96MT8 703 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms