RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 NXF3Q9H4D5 531 aaKnown RBP8.77□□□□□ -1.01
SMAD4-204ENST00000586253 TMEM206Q9H813 350 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 RSAD1Q9HA92 442 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 KANSL3Q9P2N6 904 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 EXOC7Q9UPT5 735 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 STYXL1Q9Y6J8 313 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 NLRC5Q86WI3 1866 aa8.77□□□□□ -1.01
SMAD4-204ENST00000586253 MEIS3P2A8K0S8 358 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 C5orf67F2Z3F1 127 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 H3BM21 787 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 CLDN3O15551 220 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 KLRC4O43908 158 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 GADD45BO75293 160 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 PRPF40AO75400 957 aaKnown RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 RPN1P04843 607 aaKnown RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 RB1P06400 928 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 IBSPP21815 317 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 CASP1P29466 404 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 GRM5P41594 1212 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 GATMP50440 423 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 CASP5P51878 434 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 KCNB1Q14721 858 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 NOLC1Q14978 699 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 BMT2Q1RMZ1 405 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 ZC2HC1CQ53FD0 456 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 NOMO2Q5JPE7 1267 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 SLFN12LQ6IEE8 588 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 EPM2AIP1Q7L775 607 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 URGCPQ8TCY9 931 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 HELQQ8TDG4 1101 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 LPPQ93052 612 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 CCDC47Q96A33 483 aaKnown RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 ZFP42Q96MM3 310 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 TCHPQ9BT92 498 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 PLVAPQ9BX97 442 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 EXOC1Q9NV70 894 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 TBC1D7Q9P0N9 293 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 ANKFY1Q9P2R3 1169 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 USP20Q9Y2K6 914 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 HES2Q9Y543 173 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 MRPL42Q9Y6G3 142 aaKnown RBP8.76□□□□□ -1.01
SMAD4-204ENST00000586253 WASF2Q9Y6W5 498 aa8.76□□□□□ -1.01
SMAD4-204ENST00000586253 KIAA1671Q9BY89 1806 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 A0A0B4J269 797 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 ARL5CA6NH57 179 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 GOLGA6L22H0YM25 854 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 KIAA0391O15091 583 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 RECQL4O94761 1208 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 RHOBTB3O94955 611 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 ARHGEF15O94989 841 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 SMC2O95347 1197 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 MYBP10242 640 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 LAG3P18627 525 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 BMPR1AP36894 532 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 MLH1P40692 756 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 YARSP54577 528 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 SNRPFP62306 86 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 POU5F1Q01860 360 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 PAN2Q504Q3 1202 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 EPC2Q52LR7 807 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 SLC39A4Q6P5W5 647 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 LRRC55Q6ZSA7 311 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 TMEM192Q8IY95 271 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 SYCP3Q8IZU3 236 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 DEFB123Q8N688 67 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 SPATA20Q8TB22 786 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 ZNF507Q8TCN5 953 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 P2RX5Q93086 422 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 GSDMAQ96QA5 445 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 RPS6KC1Q96S38 1066 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 CCDC94Q9BW85 323 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 FGFBP2Q9BYJ0 223 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 GTPBP4Q9BZE4 634 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 CWH43Q9H720 699 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 TOPORSQ9NS56 1045 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 TYW1Q9NV66 732 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 TBC1D13Q9NVG8 400 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 RMND1Q9NWS8 449 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 SNTG2Q9NY99 539 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 CGNQ9P2M7 1197 aaKnown RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 PARP2Q9UGN5 583 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-204ENST00000586253 MYO9BQ13459 2157 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 CITO14578 2027 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
SMAD4-204ENST00000586253 TDRD15B5MCY1 1934 aaKnown RBP8.74□□□□□ -1.01
SMAD4-204ENST00000586253 OGTO15294 1046 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 FAM189A1O60320 539 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 PRPF6O94906 941 aaKnown RBP8.74□□□□□ -1.01
SMAD4-204ENST00000586253 KIF20AO95235 890 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 CLTAP09496 248 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 GARTP22102 1010 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 AKAP5P24588 427 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 ADSSP30520 456 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 CTNNB1P35222 781 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 PPM1AP35813 382 aa8.74□□□□□ -1.01
SMAD4-204ENST00000586253 MATR3P43243 847 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMAD4-204ENST00000586253 RNASELQ05823 741 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms