RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 MCM6Q14566 821 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 GLRA4Q5JXX5 417 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 CYP26C1Q6V0L0 522 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 BICD1Q96G01 975 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 UROC1Q96N76 676 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 ACAP3Q96P50 834 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 PYM1Q9BRP8 204 aaKnown RBP20.47■□□□□ 0.87
ATG4D-203ENST00000585752 TARS2Q9BW92 718 aaKnown RBP20.47■□□□□ 0.87
ATG4D-203ENST00000585752 SLC38A7Q9NVC3 462 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 ARHGAP28Q9P2N2 729 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 CACNG4Q9UBN1 327 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 SORCS3Q9UPU3 1222 aa20.47■□□□□ 0.87
ATG4D-203ENST00000585752 DENND4AQ7Z401 1863 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 KIF4AO95239 1232 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 EDN1P05305 212 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 SPATA31D3P0C874 917 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 MCF2P10911 925 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 PSMD5Q16401 504 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 SPATA31D4Q6ZUB0 917 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 SV2BQ7L1I2 683 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 UBALD2Q8IYN6 164 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 ZDHHC14Q8IZN3 488 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 KREMEN2Q8NCW0 462 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 PAAF1Q9BRP4 392 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 KCNH6Q9H252 994 aa20.46■□□□□ 0.87
ATG4D-203ENST00000585752 TBCAO75347 108 aaKnown RBP20.45■□□□□ 0.86
ATG4D-203ENST00000585752 B3GAT3O94766 335 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 C1RP00736 705 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 AXDND1Q5T1B0 1012 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-203ENST00000585752 LIN9Q5TKA1 542 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 DCLRE1AQ6PJP8 1040 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 SHC4Q6S5L8 630 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 PRSS55Q6UWB4 352 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-203ENST00000585752 MPZL3Q6UWV2 235 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 BMP8AQ7Z5Y6 402 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 DAW1Q8N136 415 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 IQUBQ8NA54 791 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 CMASQ8NFW8 434 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-203ENST00000585752 SPIRE2Q8WWL2 714 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 SMG7Q92540 1137 aaKnown RBP20.45■□□□□ 0.86
ATG4D-203ENST00000585752 CHAMP1Q96JM3 812 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 IPO9Q96P70 1041 aaKnown RBP20.45■□□□□ 0.86
ATG4D-203ENST00000585752 CDT1Q9H211 546 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 ZHX3Q9H4I2 956 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 BLOC1S4Q9NUP1 217 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 ANKFY1Q9P2R3 1169 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 LIMD1Q9UGP4 676 aa20.45■□□□□ 0.86
ATG4D-203ENST00000585752 TGM5O43548 720 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 FAM13AO94988 1023 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 EFEMP2O95967 443 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 RPL17P18621 184 aaKnown RBP20.44■□□□□ 0.86
ATG4D-203ENST00000585752 GBP2P32456 591 aaPredicted RBP20.44■□□□□ 0.86
ATG4D-203ENST00000585752 CLCNKBP51801 687 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 RESP18Q5W5W9 173 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 ADALQ6DHV7 355 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.44■□□□□ 0.86
ATG4D-203ENST00000585752 DHX58Q96C10 678 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 DDX27Q96GQ7 796 aaKnown RBP20.44■□□□□ 0.86
ATG4D-203ENST00000585752 NTPCRQ9BSD7 190 aaKnown RBP20.44■□□□□ 0.86
ATG4D-203ENST00000585752 LRRC27Q9C0I9 530 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 CUEDC2Q9H467 287 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 GDPD2Q9HCC8 539 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 ODF2LQ9ULJ1 636 aa20.44■□□□□ 0.86
ATG4D-203ENST00000585752 SMIM28A0A1B0GU29 152 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 CLDN3O15551 220 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 TOM1L1O75674 476 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 AMPD3Q01432 767 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 CACNB1Q02641 598 aaPredicted RBP20.43■□□□□ 0.86
ATG4D-203ENST00000585752 MAPK7Q13164 816 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
ATG4D-203ENST00000585752 RTP2Q5QGT7 225 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 MYCT1Q8N699 235 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 PPP1R10Q96QC0 940 aaKnown RBP20.43■□□□□ 0.86
ATG4D-203ENST00000585752 ZDHHC7Q9NXF8 308 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 NUB1Q9Y5A7 615 aa20.43■□□□□ 0.86
ATG4D-203ENST00000585752 PDCD11Q14690 1871 aaKnown RBP20.42■□□□□ 0.86
ATG4D-203ENST00000585752 POLR2DO15514 142 aaKnown RBP20.42■□□□□ 0.86
ATG4D-203ENST00000585752 CEP57L1Q8IYX8 460 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 FBXL6Q8N531 539 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 CEP120Q8N960 986 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 TMEM161BQ8NDZ6 487 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 PIK3R5Q8WYR1 880 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 PRRX2Q99811 253 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 CXCL16Q9H2A7 254 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 KCNH3Q9ULD8 1083 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 VWA8A3KMH1 1905 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 TECTAO75443 2155 aa20.42■□□□□ 0.86
ATG4D-203ENST00000585752 NPHP3-ACAD11A0A0J9YXS1 232 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 TMEM189-UBE2V1I3L0A0 370 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 K7ENM7 598 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 RFPL2O75678 378 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 MAPTP10636 758 aaKnown RBP20.41■□□□□ 0.86
ATG4D-203ENST00000585752 SCP2P22307 547 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 CMA1P23946 247 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 ABCD1P33897 745 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 LIG4P49917 911 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 PPM1LQ5SGD2 360 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 ZPBP2Q6X784 338 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 TAS1R3Q7RTX0 852 aa20.41■□□□□ 0.86
ATG4D-203ENST00000585752 HAUS6Q7Z4H7 955 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms