RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TRAPPC3O43617 180 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 TBC1D4O60343 1298 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 ABLIM3O94929 683 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 OR52Z1P0C646 297 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 LIG1P18858 919 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 PDIA5Q14554 519 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 MLF2Q15773 248 aaPredicted RBP15.92■□□□□ 0.14
SDF2-202ENST00000585428 TMEM132AQ24JP5 1023 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 ZNF528Q3MIS6 628 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 PABPC1LQ4VXU2 614 aaKnown RBP15.92■□□□□ 0.14
SDF2-202ENST00000585428 ATF7IP2Q5U623 682 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 ZC3H14Q6PJT7 736 aaKnown RBP15.92■□□□□ 0.14
SDF2-202ENST00000585428 ANKS3Q6ZW76 656 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 NPAS3Q8IXF0 933 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 SUMF1Q8NBK3 374 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 C3orf58Q8NDZ4 430 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 ZNF461Q8TAF7 563 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 KIFAP3Q92845 792 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 RMDN1Q96DB5 314 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 IFT74Q96LB3 600 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 UROC1Q96N76 676 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 KIFC3Q9BVG8 833 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 FOXP1Q9H334 677 aaPredicted RBP15.92■□□□□ 0.14
SDF2-202ENST00000585428 PTPRHQ9HD43 1115 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 AVENQ9NQS1 362 aaPredicted RBP15.92■□□□□ 0.14
SDF2-202ENST00000585428 GDE1Q9NZC3 331 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 CDY1Q9Y6F8 540 aa15.92■□□□□ 0.14
SDF2-202ENST00000585428 SPTBN4Q9H254 2564 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 ARHGEF37A1IGU5 675 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 TKTP29401 623 aaKnown RBP15.91■□□□□ 0.14
SDF2-202ENST00000585428 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
SDF2-202ENST00000585428 PFKPQ01813 784 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 GUCY1B3Q02153 619 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 FZD5Q13467 585 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 SAFBQ15424 915 aaKnown RBP eCLIP15.91■□□□□ 0.14
SDF2-202ENST00000585428 GLRA4Q5JXX5 417 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 SLC8B1Q6J4K2 584 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 KIAA2013Q8IYS2 634 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 CLDN23Q96B33 292 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 DDX27Q96GQ7 796 aaKnown RBP15.91■□□□□ 0.14
SDF2-202ENST00000585428 ACO2Q99798 780 aaKnown RBP15.91■□□□□ 0.14
SDF2-202ENST00000585428 PLA2G2FQ9BZM2 168 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 BHMT2Q9H2M3 363 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 FBXO4Q9UKT5 387 aa15.91■□□□□ 0.14
SDF2-202ENST00000585428 ZNF292O60281 2723 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 SHISA7A6NL88 538 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 ECI2O75521 394 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 RHOP08100 348 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 PTPN2P17706 415 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 GRM5P41594 1212 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 BRCC3P46736 316 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 SOX4Q06945 474 aaPredicted RBP15.9■□□□□ 0.14
SDF2-202ENST00000585428 MRPL58Q14197 206 aaKnown RBP15.9■□□□□ 0.14
SDF2-202ENST00000585428 DCLK2Q8N568 766 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 FBXO18Q8NFZ0 1043 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 RUBCNQ92622 972 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 MCRS1Q96EZ8 462 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 NELL2Q99435 816 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 KXD1Q9BQD3 176 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 BCO2Q9BYV7 579 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 TMEM134Q9H6X4 195 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 GOLGA2P5Q9HBQ8 144 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 KIAA1024Q9UPX6 916 aa15.9■□□□□ 0.14
SDF2-202ENST00000585428 MRPS23Q9Y3D9 190 aaKnown RBP15.9■□□□□ 0.14
SDF2-202ENST00000585428 I3L4J1 428 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 ATF2P15336 505 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 CD72P21854 359 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 CCT6AP40227 531 aaKnown RBP15.89■□□□□ 0.13
SDF2-202ENST00000585428 NPTX2P47972 431 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 SLC5A9Q2M3M2 681 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 ZBTB41Q5SVQ8 909 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 HAUS3Q68CZ6 603 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 TAS1R3Q7RTX0 852 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 CEP120Q8N960 986 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 NELL1Q92832 810 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 C8orf76Q96K31 380 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 ZMAT2Q96NC0 199 aaKnown RBP15.89■□□□□ 0.13
SDF2-202ENST00000585428 LLPHQ9BRT6 129 aaKnown RBP15.89■□□□□ 0.13
SDF2-202ENST00000585428 NTPCRQ9BSD7 190 aaKnown RBP15.89■□□□□ 0.13
SDF2-202ENST00000585428 LTB4R2Q9NPC1 389 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 LIMCH1Q9UPQ0 1083 aa15.89■□□□□ 0.13
SDF2-202ENST00000585428 LAMTOR5O43504 91 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 MICAL2O94851 1124 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 KCNE1P15382 129 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 PROZP22891 400 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 MAGEA9P43362 315 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 TRAPPC10P48553 1259 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 UBXN2BQ14CS0 331 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 PRSS36Q5K4E3 855 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 TTC38Q5R3I4 469 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 TANGO2Q6ICL3 276 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
SDF2-202ENST00000585428 TCEAL8Q8IYN2 117 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 DAW1Q8N136 415 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 ING5Q8WYH8 240 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 ELSPBP1Q96BH3 223 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 CDT1Q9H211 546 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 TOPORSQ9NS56 1045 aaPredicted RBP15.88■□□□□ 0.13
SDF2-202ENST00000585428 DDX19AQ9NUU7 478 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms