RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 CCL16O15467 120 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 LRRN2O75325 713 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 F13A1P00488 732 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 C8AP07357 584 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 HNRNPA1P09651 372 aaKnown RBP eCLIP14.42□□□□□ -0.18e-6■□□□□ 10.1
CDK5RAP3-234ENST00000584525 SPATA31C1P0DKV0 1188 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 GLULP15104 373 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 STARD6P59095 220 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 TUSC3Q13454 348 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 TMEM132AQ24JP5 1023 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 FAM173BQ6P4H8 233 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 FGF14Q92915 247 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 CLSTN3Q9BQT9 956 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 BHMT2Q9H2M3 363 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 SPATA6Q9NWH7 488 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 CCDC39Q9UFE4 941 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 FBXW11Q9UKB1 542 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 CLIC4Q9Y696 253 aa14.42□□□□□ -0.1
CDK5RAP3-234ENST00000584525 EP300Q09472 2414 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 ZNF292O60281 2723 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 MED19A0JLT2 244 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 XYLBO75191 536 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 KIF4AO95239 1232 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 MARCKSP29966 332 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 CDC25AP30304 524 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 PSMD5Q16401 504 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 SLC44A4Q53GD3 710 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 PADI6Q6TGC4 694 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 MTSS1LQ765P7 747 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 ZBTB8OSQ8IWT0 167 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 DCLK2Q8N568 766 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 ITFG1Q8TB96 612 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 LNX1Q8TBB1 728 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 PIK3R5Q8WYR1 880 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 FGF13Q92913 245 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 IFT74Q96LB3 600 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 BCO2Q9BYV7 579 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 GPRC5CQ9NQ84 441 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 PRMT7Q9NVM4 692 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 ATP6V1DQ9Y5K8 247 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 DENND4AQ7Z401 1863 aa14.41□□□□□ -0.1
CDK5RAP3-234ENST00000584525 ZMYM2Q9UBW7 1377 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 KANSL1LA0AUZ9 987 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 FAM170BA6NMN3 283 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 E9PMD0 336 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 ADAM12O43184 909 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 LAMTOR5O43504 91 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 SLC26A4O43511 780 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 KRT18P05783 430 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 THP07101 528 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 ANP32AP39687 249 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 PUM1Q14671 1186 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 UBXN2BQ14CS0 331 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 PPP2R5AQ15172 486 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 MLF2Q15773 248 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 MAML2Q8IZL2 1156 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 KCTD17Q8N5Z5 321 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 SLC7A14Q8TBB6 771 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 USP28Q96RU2 1077 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 PLIN2Q99541 437 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 SNTG2Q9NY99 539 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 CFAP45Q9UL16 551 aa14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 MTF2Q9Y483 593 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-234ENST00000584525 MYH15Q9Y2K3 1946 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PTGESO14684 152 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 N4BP3O15049 544 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 LIG1P18858 919 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 HOXA9P31269 272 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PFKPQ01813 784 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PRKCQQ04759 706 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 ELAVL2Q12926 359 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 IL17AQ16552 155 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 AXDND1Q5T1B0 1012 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PDXDC1Q6P996 788 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 KRI1Q8N9T8 703 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PRIMPOLQ96LW4 560 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 KXD1Q9BQD3 176 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 FZD8Q9H461 694 aa14.39□□□□□ -0.11
CDK5RAP3-234ENST00000584525 CACNA1AO00555 2505 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 SPTLC2O15270 562 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 RECQL4O94761 1208 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 CD72P21854 359 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 OR1D2P34982 312 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 CSTF1Q05048 431 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PRPF4BQ13523 1007 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 DHX8Q14562 1220 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PABPC1LQ4VXU2 614 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 SUMF1Q8NBK3 374 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 DEPTORQ8TB45 409 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 ATRIPQ8WXE1 791 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 KIFAP3Q92845 792 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 DRC1Q96MC2 740 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 C2orf40Q9H1Z8 148 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PDZD7Q9H5P4 517 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 HCFC1R1Q9NWW0 138 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 USP20Q9Y2K6 914 aa14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 SRPRBQ9Y5M8 271 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-234ENST00000584525 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
CDK5RAP3-234ENST00000584525 PLA2G4BP0C869 781 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms