RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 AKAP5P24588 427 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ITGB8P26012 769 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FAM189BP81408 668 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 DUOXA2Q1HG44 320 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FIGNQ5HY92 759 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TDRD10Q5VZ19 366 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 LMBRD2Q68DH5 695 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TMC6Q7Z403 805 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 OR5B17Q8NGF7 314 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ZNF516Q92618 1163 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PLCB1Q9NQ66 1216 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PARP2Q9UGN5 583 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 DAAM1Q9Y4D1 1078 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TTC3P53804 2025 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 MKI67P46013 3256 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 XPOTO43592 962 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 C4BPAP04003 597 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TFAMQ00059 246 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 KCNMA1Q12791 1236 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 BIRC3Q13489 604 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TCTN1Q2MV58 587 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 AGMOQ6ZNB7 445 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 DEFB128Q7Z7B8 93 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RTN4RL1Q86UN2 441 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 C7orf61Q8IZ16 206 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FBXL13Q8NEE6 735 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CACTINQ8WUQ7 758 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RSPH1Q8WYR4 309 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 VWCEQ96DN2 955 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 KIF12Q96FN5 646 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RSAD1Q9HA92 442 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TMEM161AQ9NX61 479 aa18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 UBQLN1Q9UMX0 589 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.07■□□□□ 0.481e-7■■■□□ 17.2
CDK5RAP3-230ENST00000584042 TDRD15B5MCY1 1934 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-230ENST00000584042 MEIS3P2A8K0S8 358 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GOLGA6L6A8MZA4 724 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 EFCAB14O75071 495 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ZC3H11AO75152 810 aaKnown RBP eCLIP18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RFX1P22670 979 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 MLH1P40692 756 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PIK3CAP42336 1068 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PTPN21Q16825 1174 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TRIM65Q6PJ69 517 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TRAPPC11Q7Z392 1133 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RPUSD2Q8IZ73 545 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TAS1R2Q8TE23 839 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 LPPQ93052 612 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RPS6KC1Q96S38 1066 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PPP1R9BQ96SB3 815 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CRACR2AQ9BSW2 395 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 NUP58Q9BVL2 599 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 LSM14BQ9BX40 385 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TTYH3Q9C0H2 523 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 INTS2Q9H0H0 1204 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 IMPACTQ9P2X3 320 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FBXL5Q9UKA1 691 aa18.06■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RBAK-RBAKDNI3L0D1 243 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ENPP3O14638 875 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PTGESO14684 152 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 HLA-DRAP01903 254 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TRIM21P19474 475 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CYP3A5P20815 502 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PON1P27169 355 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 KLK7P49862 253 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TBX2Q13207 712 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PPIGQ13427 754 aaKnown RBP eCLIP18.05■□□□□ 0.482e-14■■■■■ 28.8
CDK5RAP3-230ENST00000584042 ZBTB6Q15916 424 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 DRC7Q8IY82 874 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 BEST2Q8NFU1 509 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 LMO3Q8TAP4 145 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 FAM84AQ96KN4 292 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 PCMTD1Q96MG8 357 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ZMAT2Q96NC0 199 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 IL23AQ9NPF7 189 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SLC38A7Q9NVC3 462 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 RAB20Q9NX57 234 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 KLK14Q9P0G3 267 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ITGA11Q9UKX5 1188 aa18.05■□□□□ 0.48
CDK5RAP3-230ENST00000584042 SMIM28A0A1B0GU29 152 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 ABHD14A-ACY1A0A1B0GW23 586 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 A0A1W2PQJ5 194 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 HOXA2O43364 376 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 BAIAP3O94812 1187 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 VNN1O95497 513 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 CSF2RAP15509 400 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GRIK3Q13003 919 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 NCOA4Q13772 614 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 IKBKEQ14164 716 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GLRA4Q5JXX5 417 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 DPY19L2P1Q6NXN4 242 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 NPAS4Q8IUM7 802 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 C1orf127Q8N9H9 656 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 EHBP1Q8NDI1 1231 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 GSTCDQ8NEC7 633 aa18.04■□□□□ 0.48
CDK5RAP3-230ENST00000584042 NEK11Q8NG66 645 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms