RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MAN2A1Q16706 1144 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 NOMO2Q5JPE7 1267 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 CLLU1OSQ5K130 101 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 RNF214Q8ND24 703 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 CCDC127Q96BQ5 260 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 GAD1Q99259 594 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 TUBGCP2Q9BSJ2 902 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
CDRT1-207ENST00000583965 UBE2OQ9C0C9 1292 aaKnown RBP12.63□□□□□ -0.39
CDRT1-207ENST00000583965 SLC38A7Q9NVC3 462 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 KLK14Q9P0G3 267 aa12.63□□□□□ -0.39
CDRT1-207ENST00000583965 LIMA1Q9UHB6 759 aaKnown RBP12.63□□□□□ -0.39
CDRT1-207ENST00000583965 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDRT1-207ENST00000583965 SMIM28A0A1B0GU29 152 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 LRRC10BA6NIK2 292 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 PTGESO14684 152 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 N4BP1O75113 896 aaKnown RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 DGKIO75912 1065 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 UPP2O95045 317 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 DLATP10515 647 aaKnown RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 FGFR1P11362 822 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 TNNI1P19237 187 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 CYP3A5P20815 502 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 KRT31Q15323 416 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 ZBTB6Q15916 424 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 HSP90AA4PQ58FG1 418 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 TCERG1LQ5VWI1 586 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 JADE1Q6IE81 842 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 GSTCDQ8NEC7 633 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 BEST2Q8NFU1 509 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 PLEKHO2Q8TD55 490 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 SLC35C1Q96A29 364 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 ZNF689Q96CS4 500 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 ANKRD36BP1Q96IX9 119 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 RNPC3Q96LT9 517 aaKnown RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 CASD1Q96PB1 797 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 PPP1R10Q96QC0 940 aaKnown RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
CDRT1-207ENST00000583965 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 UBQLN1Q9UMX0 589 aaKnown RBP12.62□□□□□ -0.39
CDRT1-207ENST00000583965 CARNS1A5YM72 827 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 PMM2O15305 246 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 GJB5O95377 273 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 TNNC2P02585 160 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 AFPP02771 609 aaKnown RBP12.61□□□□□ -0.39
CDRT1-207ENST00000583965 NFICP08651 508 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 ATP1A3P13637 1013 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 ATP2A2P16615 1042 aaKnown RBP12.61□□□□□ -0.39
CDRT1-207ENST00000583965 SCNN1GP51170 649 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 WNT7BP56706 349 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 DLG4P78352 724 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 HTRA4P83105 476 aaPredicted RBP12.61□□□□□ -0.39
CDRT1-207ENST00000583965 SHHQ15465 462 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 C1orf220Q5T0J3 134 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 EFCAB13Q8IY85 973 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 CMTR2Q8IYT2 770 aaKnown RBP12.61□□□□□ -0.39
CDRT1-207ENST00000583965 ZMAT2Q96NC0 199 aaKnown RBP12.61□□□□□ -0.39
CDRT1-207ENST00000583965 RC3H2Q9HBD1 1191 aaKnown RBP12.61□□□□□ -0.39
CDRT1-207ENST00000583965 TMEM8AQ9HCN3 771 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 INPP5FQ9Y2H2 1132 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 INSL6Q9Y581 213 aa12.61□□□□□ -0.39
CDRT1-207ENST00000583965 RANBP2P49792 3224 aaKnown RBP12.6□□□□□ -0.39
CDRT1-207ENST00000583965 TBKBP1A7MCY6 615 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 P4HA2O15460 535 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 MXI1P50539 228 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 COPB1P53618 953 aaKnown RBP12.6□□□□□ -0.39
CDRT1-207ENST00000583965 TFAMQ00059 246 aaKnown RBP12.6□□□□□ -0.39
CDRT1-207ENST00000583965 RNASELQ05823 741 aaKnown RBP12.6□□□□□ -0.39
CDRT1-207ENST00000583965 CETN1Q12798 172 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 KCNH2Q12809 1159 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 TUSC3Q13454 348 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 NAB2Q15742 525 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 ZACNQ401N2 412 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 VWA3BQ502W6 1294 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 GLRA4Q5JXX5 417 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 C9orf50Q5SZB4 431 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 HERC6Q8IVU3 1022 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 LRRC43Q8N309 656 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 ZNF516Q92618 1163 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 UROC1Q96N76 676 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 FAM193BQ96PV7 902 aaPredicted RBP12.6□□□□□ -0.39
CDRT1-207ENST00000583965 YME1L1Q96TA2 773 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 POP1Q99575 1024 aaKnown RBP12.6□□□□□ -0.39
CDRT1-207ENST00000583965 RAD9AQ99638 391 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 CXCL16Q9H2A7 254 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 NDST4Q9H3R1 872 aa12.6□□□□□ -0.39
CDRT1-207ENST00000583965 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms