RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 HDAC7Q8WUI4 952 aa12.72□□□□□ -0.37
NUP85-224ENST00000583948 TMEM143Q96AN5 459 aa12.72□□□□□ -0.37
NUP85-224ENST00000583948 BORCS6Q96GS4 357 aa12.72□□□□□ -0.37
NUP85-224ENST00000583948 FAM167AQ96KS9 214 aa12.72□□□□□ -0.37
NUP85-224ENST00000583948 FAM126AQ9BYI3 521 aaPredicted RBP12.72□□□□□ -0.37
NUP85-224ENST00000583948 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
NUP85-224ENST00000583948 TBC1D22BQ9NU19 505 aa12.72□□□□□ -0.37
NUP85-224ENST00000583948 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
NUP85-224ENST00000583948 SOBPA7XYQ1 873 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 LRP3O75074 770 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 CHRNB1P11230 501 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 XBP1P17861 261 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 CCNE1P24864 410 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 VIPR2P41587 438 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 CXCL12P48061 93 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 RAB27AP51159 221 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 NRLP54845 237 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 USP41Q3LFD5 358 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 PABPC1LQ4VXU2 614 aaKnown RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 ELMSAN1Q6PJG2 1045 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 C19orf48Q6RUI8 117 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 KBTBD6Q86V97 674 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 FAM3CQ92520 227 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 ZSWIM3Q96MP5 696 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 NELL2Q99435 816 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 GDPD2Q9HCC8 539 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 FNIP2Q9P278 1114 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 DPP7Q9UHL4 492 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 SSX2IPQ9Y2D8 614 aa12.71□□□□□ -0.37
NUP85-224ENST00000583948 MRPS23Q9Y3D9 190 aaKnown RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 ZFP37Q9Y6Q3 630 aaPredicted RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 PDCD11Q14690 1871 aaKnown RBP12.71□□□□□ -0.37
NUP85-224ENST00000583948 IGSF10Q6WRI0 2623 aa12.71□□□□□ -0.38
NUP85-224ENST00000583948 CASTOR2A6NHX0 329 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
NUP85-224ENST00000583948 CYP3A4P08684 503 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 GJA1P17302 382 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 CCR2P41597 374 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 KRT85P78386 507 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
NUP85-224ENST00000583948 FAM78AQ5JUQ0 283 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
NUP85-224ENST00000583948 LIN9Q5TKA1 542 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 PKN3Q6P5Z2 889 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 C12orf50Q8NA57 414 aaPredicted RBP12.7□□□□□ -0.38
NUP85-224ENST00000583948 PRPF31Q8WWY3 499 aaKnown RBP12.7□□□□□ -0.38
NUP85-224ENST00000583948 ANP32EQ9BTT0 268 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
NUP85-224ENST00000583948 BRD9Q9H8M2 597 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 VPS54Q9P1Q0 977 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 KANSL3Q9P2N6 904 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 ADAM28Q9UKQ2 775 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 PIAS3Q9Y6X2 628 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 EML5Q05BV3 1969 aa12.7□□□□□ -0.38
NUP85-224ENST00000583948 SPAG17Q6Q759 2223 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 TADA2AO75478 443 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 ECI2O75521 394 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 KIF4AO95239 1232 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 RHOP08100 348 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 GDI1P31150 447 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 NOVA1P51513 510 aaKnown RBP12.69□□□□□ -0.38
NUP85-224ENST00000583948 CCR3P51677 355 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 PSMD5Q16401 504 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 FAM171A1Q5VUB5 890 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 TXNDC11Q6PKC3 985 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 VITQ6UXI7 678 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 ANO5Q75V66 913 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 GATA6Q92908 595 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 COLEC11Q9BWP8 271 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 NIFKQ9BYG3 293 aaKnown RBP12.69□□□□□ -0.38
NUP85-224ENST00000583948 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
NUP85-224ENST00000583948 MRPS17Q9Y2R5 130 aaKnown RBP12.69□□□□□ -0.38
NUP85-224ENST00000583948 CELSR3Q9NYQ7 3312 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 TCHHQ07283 1943 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 CNTNAP2Q9UHC6 1331 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 KIF26AQ9ULI4 1882 aaPredicted RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 TAF4O00268 1085 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 ZBTB39O15060 712 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 B4GALT5O43286 388 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 EXTL3O43909 919 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 MAFO75444 373 aaPredicted RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 OR1D2P34982 312 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 ZNF252P-AS1Q0IIN9 211 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 PFKFB3Q16875 520 aaPredicted RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 SOWAHCQ53LP3 525 aaPredicted RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 BRAPQ7Z569 592 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 LONP2Q86WA8 852 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
NUP85-224ENST00000583948 ZCCHC14Q8WYQ9 949 aaKnown RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 DDX1Q92499 740 aaKnown RBP12.68□□□□□ -0.38
NUP85-224ENST00000583948 RSPRY1Q96DX4 576 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms