RNA–Protein interactions for RNA: ENST00000583837.5

BRIP1-205, Transcript of BRCA1 interacting protein C-terminal helicase 1, human

TSL 5

Gene BRIP1, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRIP1-205	ENST00000583837	ACAP3	Q96P50	834 aa		11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	EIF2A	Q9BY44	585 aa	Known RBP	11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	TRIM6	Q9C030	488 aa	Predicted RBP	11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	NDST4	Q9H3R1	872 aa		11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	MMRN2	Q9H8L6	949 aa		11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	RPF1	Q9H9Y2	349 aa	Known RBP	11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	CHST12	Q9NRB3	414 aa		11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	SNTG2	Q9NY99	539 aa		11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	CPSF3	Q9UKF6	684 aa	Known RBP	11.17	□□□□□ -0.62
BRIP1-205	ENST00000583837	LGALS16	A8MUM7	142 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	BAIAP3	O94812	1187 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	AFP	P02771	609 aa	Known RBP	11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	CXCL10	P02778	98 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	TRIM49	P0CI25	452 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	TRIM49C	P0CI26	452 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	ACTN1	P12814	892 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	DLG4	P78352	724 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	TFF2	Q03403	129 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	BFSP1	Q12934	665 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	PSMD6	Q15008	389 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	SURF1	Q15526	300 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	KYAT1	Q16773	422 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	MIIP	Q5JXC2	388 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	UBXN11	Q5T124	520 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	FKBP15	Q5T1M5	1219 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	SPRED2	Q7Z698	418 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	PARD3B	Q8TEW8	1205 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	CCDC51	Q96ER9	411 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	MRFAP1L1	Q96HT8	127 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	POP1	Q99575	1024 aa	Known RBP	11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	CCDC94	Q9BW85	323 aa	Predicted RBP	11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	APOL6	Q9BWW8	343 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	PDE11A	Q9HCR9	933 aa		11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	RBAK	Q9NYW8	714 aa	Predicted RBP	11.16	□□□□□ -0.62
BRIP1-205	ENST00000583837	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	LACTBL1	A8MY62	500 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	FAM189A1	O60320	539 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	STX10	O60499	249 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	DLAT	P10515	647 aa	Known RBP	11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	TNNI1	P19237	187 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	IBSP	P21815	317 aa	Predicted RBP	11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	GRM5	P41594	1212 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	KCNQ1	P51787	676 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	DSC3	Q14574	896 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	ENOX2	Q16206	610 aa	Known RBP	11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	TCTN1	Q2MV58	587 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	USP37	Q86T82	979 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	BRSK2	Q8IWQ3	736 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	SPC24	Q8NBT2	197 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	SLC35C1	Q96A29	364 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	NECAB3	Q96P71	396 aa	Predicted RBP	11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	FNBP1	Q96RU3	617 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	ADAM2	Q99965	735 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	TMX1	Q9H3N1	280 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	INTS13	Q9NVM9	706 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	PARP2	Q9UGN5	583 aa		11.15	□□□□□ -0.62
BRIP1-205	ENST00000583837	TLL1	O43897	1013 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	MGEA5	O60502	916 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	NBN	O60934	754 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	IL18RAP	O95256	599 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	CDC25B	P30305	580 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	GCLM	P48507	274 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	FMO5	P49326	533 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	YARS	P54577	528 aa	Known RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	WNT7B	P56706	349 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	WDR5	P61964	334 aa	Known RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	PPP3CA	Q08209	521 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	SYCP1	Q15431	976 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	SLC10A6	Q3KNW5	377 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	C1orf220	Q5T0J3	134 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	TMC6	Q7Z403	805 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	SMG8	Q8ND04	991 aa	Known RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	DBF4B	Q8NFT6	615 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	SEPT8	Q92599	483 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	ZNF516	Q92618	1163 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	IFIH1	Q9BYX4	1025 aa	Known RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	RNF39	Q9H2S5	420 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	CERS4	Q9HA82	394 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	RAPGEFL1	Q9UHV5	662 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	HES2	Q9Y543	173 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	IPP	Q9Y573	584 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	PCDHB2	Q9Y5E7	798 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	MICAL3	Q7RTP6	2002 aa		11.14	□□□□□ -0.63
BRIP1-205	ENST00000583837	LCHN	A4D1U4	455 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	PARN	O95453	639 aa	Known RBP	11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	CXCL8	P10145	99 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	ITGA4	P13612	1032 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	AKAP5	P24588	427 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	MCCD1	P59942	119 aa	Predicted RBP	11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	POU5F1	Q01860	360 aa	Known RBP	11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	ENPEP	Q07075	957 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	KCNMA1	Q12791	1236 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	PLEKHG4	Q58EX7	1191 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	VSTM4	Q8IW00	320 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms