RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 TNNC2P02585 160 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 CXCL8P10145 99 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 FGFR1P11362 822 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 EEF1GP26641 437 aaKnown RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 BMPR1AP36894 532 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 MLH1P40692 756 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 VAMP7P51809 220 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 ZNF445P59923 1031 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 ERVK-21P61565 698 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 MYL5Q02045 173 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 KRT17Q04695 432 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 CETN1Q12798 172 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 PDE12Q6L8Q7 609 aaKnown RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 LRRC55Q6ZSA7 311 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 CBWD2Q8IUF1 395 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 CEP120Q8N960 986 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 LPPQ93052 612 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 SAAL1Q96ER3 474 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 BORCS6Q96GS4 357 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 ZNF558Q96NG5 402 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 TGS1Q96RS0 853 aaKnown RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 APOL6Q9BWW8 343 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 SRRTQ9BXP5 876 aaKnown RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 FAM124BQ9H5Z6 455 aaPredicted RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 SLC28A3Q9HAS3 691 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 INTS13Q9NVM9 706 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 MAGEC2Q9UBF1 373 aaPredicted RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 PUF60Q9UHX1 559 aaKnown RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 ITGA11Q9UKX5 1188 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 CTNND2Q9UQB3 1225 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 COLQQ9Y215 455 aaPredicted RBP10.09□□□□□ -0.79
UBBP4-201ENST00000583708 SSX2IPQ9Y2D8 614 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 FAN1Q9Y2M0 1017 aa10.09□□□□□ -0.79
UBBP4-201ENST00000583708 SYCE3A1L190 88 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 GOLGA8IPA6NC78 632 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 LRRC10BA6NIK2 292 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 GOLGA8JA6NMD2 632 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 BECN2A8MW95 431 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 TISP43B9A030 160 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 PTGESO14684 152 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 AKAP3O75969 853 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 STAU1O95793 577 aaKnown RBP10.08□□□□□ -0.8
UBBP4-201ENST00000583708 C1RP00736 705 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 TPM2P07951 284 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 TNNI1P19237 187 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 ATICP31939 592 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 TNFSF9P41273 254 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 ZNF165P49910 485 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 SCNN1GP51170 649 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 PMS1P54277 932 aaKnown RBP10.08□□□□□ -0.8
UBBP4-201ENST00000583708 OSTNP61366 133 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 RBP5P82980 135 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 BFSP1Q12934 665 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 PDXDC1Q6P996 788 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 LRSAM1Q6UWE0 723 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 COLGALT2Q8IYK4 626 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 LRRC52Q8N7C0 313 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 TAF4BQ92750 862 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 KIF12Q96FN5 646 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 CGRRF1Q99675 332 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 C11orf84Q9BUA3 381 aaPredicted RBP10.08□□□□□ -0.8
UBBP4-201ENST00000583708 OXCT2Q9BYC2 517 aaPredicted RBP10.08□□□□□ -0.8
UBBP4-201ENST00000583708 PBX4Q9BYU1 374 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 LMAN2LQ9H0V9 348 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 CWH43Q9H720 699 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 NRDE2Q9H7Z3 1164 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 SPG21Q9NZD8 308 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 LMCD1Q9NZU5 365 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 INPP5FQ9Y2H2 1132 aa10.08□□□□□ -0.8
UBBP4-201ENST00000583708 ANO9A1A5B4 782 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 LINC01553A4QN01 128 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 POMCP01189 267 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 GALTP07902 379 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 TMEM191BP0C7N4 346 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 MYO1EQ12965 1108 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 NAB2Q15742 525 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 CCDC40Q4G0X9 1142 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 ANO6Q4KMQ2 910 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 SPOUT1Q5T280 376 aaKnown RBP10.07□□□□□ -0.8
UBBP4-201ENST00000583708 JADE1Q6IE81 842 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 KCNT2Q6UVM3 1135 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 TRIM59Q8IWR1 403 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 TMEM192Q8IY95 271 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 TTC39CQ8N584 583 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 RDH13Q8NBN7 331 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 CCDC150Q8NCX0 1101 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 TIFAQ96CG3 184 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 FAM212AQ96EL1 285 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 FAM81BQ96LP2 452 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 ZNF560Q96MR9 790 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 ZMAT2Q96NC0 199 aaKnown RBP10.07□□□□□ -0.8
UBBP4-201ENST00000583708 IKZF4Q9H2S9 585 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 TSPY26PQ9H489 355 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 VRTNQ9H8Y1 702 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 TMEM8AQ9HCN3 771 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 PDE11AQ9HCR9 933 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms