RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 SLC16A1P53985 500 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 TBX4P57082 545 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PPARAQ07869 468 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 GTF2H3Q13889 308 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 MLC1Q15049 377 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 LRRC41Q15345 812 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 DGKDQ16760 1214 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 GFOD2Q3B7J2 385 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 C1QL3Q5VWW1 255 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 LRSAM1Q6UWE0 723 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 GLB1L2Q8IW92 636 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 MIER2Q8N344 545 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 OR5AN1Q8NGI8 311 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 CAGE1Q8TC20 777 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 JADE3Q92613 823 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 COQ10AQ96MF6 247 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 IFT122Q9HBG6 1241 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PRSS50Q9UI38 385 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 TLK1Q9UKI8 766 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 EDARQ9UNE0 448 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHGA9Q9Y5G4 932 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHGA8Q9Y5G5 932 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHGA7Q9Y5G6 932 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHGA6Q9Y5G7 932 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHGA3Q9Y5H0 932 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHGA2Q9Y5H1 932 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 CDY2AQ9Y6F7 541 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 ERC2O15083 957 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 DTNBO60941 627 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDH8O95206 1070 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 LPLP06858 475 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 HSPA6P17066 643 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 PLA2G5P39877 138 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 SEC24CP53992 1094 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 LGALS4P56470 323 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 NHLH1Q02575 133 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 MAN2A1Q16706 1144 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 MINDY4Q4G0A6 757 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 CCAR1Q8IX12 1150 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 FATE1Q969F0 183 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 GPHA2Q96T91 129 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 NOL10Q9BSC4 688 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 ACE2Q9BYF1 805 aaPredicted RBP4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 HAPLN2Q9GZV7 340 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 NMRK2Q9NPI5 230 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 POLR3BQ9NW08 1133 aaPredicted RBP4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 DPP7Q9UHL4 492 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 SAP30BPQ9UHR5 308 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 TMPRSS11EQ9UL52 423 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 VWA7Q9Y334 891 aa4.84□□□□□ -1.63
SMCHD1-209ENST00000583441 CAND2O75155 1236 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 NDUFS2O75306 463 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 HKR1P10072 659 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 OSMP13725 252 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 SESN2P58004 480 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 MEF2AQ02078 507 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 SRSF4Q08170 494 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 ODF1Q14990 250 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 NAIF1Q69YI7 327 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 FAM180AQ6UWF9 173 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 UNQ6494/PRO21346Q6UXR6 183 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 SLC41A1Q8IVJ1 513 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 ANKRD53Q8N9V6 530 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 MDGA1Q8NFP4 955 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 TTC8Q8TAM2 541 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 GAB3Q8WWW8 586 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 ZBTB9Q96C00 473 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 SLC7A6OSQ96CW6 309 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 OSBPL6Q9BZF3 934 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 ZNF768Q9H5H4 540 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 PRDM11Q9NQV5 511 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 SAE1Q9UBE0 346 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 USP18Q9UMW8 372 aa4.83□□□□□ -1.64
SMCHD1-209ENST00000583441 TRIM38O00635 465 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 TRIM24O15164 1050 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 SEC24DO94855 1032 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 C5AR1P21730 350 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 BPIFB4P59827 614 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 FOXI1Q12951 378 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 MALLQ13021 153 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 TRIM25Q14258 630 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 MUM1L1Q5H9M0 696 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 RRP12Q5JTH9 1297 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 ZNF425Q6IV72 752 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 LMBR1LQ6UX01 489 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 BTNL9Q6UXG8 535 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 LYSMD2Q8IV50 215 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 TSPEARQ8WU66 669 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 LINC00476Q8WZB0 136 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 GCDHQ92947 438 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 DYDC2Q96IM9 177 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 RCAN3Q9UKA8 241 aa4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 NOB1Q9ULX3 412 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 POLR2AP24928 1970 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-209ENST00000583441 CCDC194A0A1B0GVG4 234 aa4.81□□□□□ -1.64
SMCHD1-209ENST00000583441 OFD1O75665 1012 aa4.81□□□□□ -1.64
SMCHD1-209ENST00000583441 FSBPO95073 299 aa4.81□□□□□ -1.64
SMCHD1-209ENST00000583441 ZRANB2O95218 330 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMCHD1-209ENST00000583441 MATN4O95460 622 aa4.81□□□□□ -1.64
SMCHD1-209ENST00000583441 GNALP38405 381 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms