RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 EMILIN2Q9BXX0 1053 aa13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 GPR62Q9BZJ7 368 aa13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 RPF1Q9H9Y2 349 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 MRPL17Q9NRX2 175 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 HPSEQ9Y251 543 aa13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 SSX2IPQ9Y2D8 614 aa13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 CITO14578 2027 aa13.74□□□□□ -0.21
SMARCE1-218ENST00000582955 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 TRIP11Q15643 1979 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 A0A1W2PQ27 194 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 A0A1W2PQ64 194 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 A0A1W2PQD8 194 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 MEFVO15553 781 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 CLASP2O75122 1294 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 B3GAT3O94766 335 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 BMP1P13497 986 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 KCNE1P15382 129 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 CLCNKBP51801 687 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 NDUFA8P51970 172 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 SOX4Q06945 474 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 SPAG1Q07617 926 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 CUL4BQ13620 913 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 PTCRAQ6ISU1 281 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 UNC13DQ70J99 1090 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 VN1R2Q8NFZ6 395 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 C18orf25Q96B23 403 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 PAGE5Q96GU1 130 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 B3GALT6Q96L58 329 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 COL25A1Q9BXS0 654 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 PLEKHA5Q9HAU0 1116 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 CD207Q9UJ71 328 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 AGO2Q9UKV8 859 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 HCFC2Q9Y5Z7 792 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 IRAK3Q9Y616 596 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 A0A0C4DFX4 3053 aa13.73□□□□□ -0.21
SMARCE1-218ENST00000582955 VCANP13611 3396 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 TTC26A0AVF1 554 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 TULP1O00294 542 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 FAM189A1O60320 539 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 KLRC2P26717 231 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 ACOT2P49753 483 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 POSTNQ15063 836 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 ENOX2Q16206 610 aaKnown RBP13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 USP41Q3LFD5 358 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 PUS10Q3MIT2 529 aaKnown RBP13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 DCLRE1AQ6PJP8 1040 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 CEP57Q86XR8 500 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 RNF168Q8IYW5 571 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 CASP10Q92851 521 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 KLHL5Q96PQ7 755 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 GOLPH3LQ9H4A5 285 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 TMEM206Q9H813 350 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 CLEC1BQ9P126 229 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 TUBGCP4Q9UGJ1 667 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 CPSF3Q9UKF6 684 aaKnown RBP13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 FAM50BQ9Y247 325 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 STYXL1Q9Y6J8 313 aa13.72□□□□□ -0.21
SMARCE1-218ENST00000582955 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 PVALEFA0A1B0GWK0 134 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 LACTBL1A8MY62 500 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 TMEM189-UBE2V1I3L0A0 370 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 DLL1O00548 723 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 PODXLO00592 558 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 EFEMP2O95967 443 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 IL9P15248 144 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 DSG1Q02413 1049 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 ELAVL2Q12926 359 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 UPP1Q16831 310 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 FAM171A1Q5VUB5 890 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 KIAA0319Q5VV43 1072 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 NOC3LQ8WTT2 800 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 SAAL1Q96ER3 474 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 MSLNLQ96KJ4 702 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 EXOC1Q9NV70 894 aa13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-218ENST00000582955 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 MBTPS2O43462 519 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 XPOTO43592 962 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 TRAPPC3O43617 180 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 LILRB3O75022 631 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 ADH1AP07327 375 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 EPCAMP16422 314 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 GARTP22102 1010 aa13.7□□□□□ -0.22
SMARCE1-218ENST00000582955 IGFBP6P24592 240 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms