RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PRKCQQ04759 706 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GRIN1Q05586 938 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ALCAMQ13740 583 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KCNB1Q14721 858 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PPP2R5AQ15172 486 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KIZQ2M2Z5 673 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LONRF3Q496Y0 759 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NT5DC1Q5TFE4 455 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TMEM173Q86WV6 379 aaPredicted RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CCDC60Q8IWA6 550 aaPredicted RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CCDC65Q8IXS2 484 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PDILTQ8N807 584 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 HELQQ8TDG4 1101 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KIFAP3Q92845 792 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SMARCE1Q969G3 411 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KLHL5Q96PQ7 755 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PNMA5Q96PV4 448 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DDX23Q9BUQ8 820 aaKnown RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NAT10Q9H0A0 1025 aaKnown RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MAN1C1Q9NR34 630 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LARSQ9P2J5 1176 aaKnown RBP9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RAB23Q9ULC3 237 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 COL4A3BPQ9Y5P4 624 aa9.6□□□□□ -0.87
PDLIM1P3-201ENST00000582370 A0A0U1RQF3 1178 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PP2D1A8MPX8 630 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ANHXE9PGG2 379 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 FOXD2O60548 495 aaPredicted RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZC3H11AO75152 810 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TBCAO75347 108 aaKnown RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GPR32O75388 356 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PROS1P07225 676 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LAMP2P13473 410 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LIG1P18858 919 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CDC25AP30304 524 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SMTNP53814 917 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SLC12A3P55017 1021 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 STIM1Q13586 685 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 HTR4Q13639 388 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CTTNQ14247 550 aaKnown RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MXD4Q14582 209 aaPredicted RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PCBP1Q15365 356 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 XKR9Q5GH70 373 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LAIR1Q6GTX8 287 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SASS6Q6UVJ0 657 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RSPO2Q6UXX9 243 aaPredicted RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RBM43Q6ZSC3 357 aaKnown RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 USP49Q70CQ1 688 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZNF598Q86UK7 904 aaKnown RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RNF169Q8NCN4 708 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SPATA20Q8TB22 786 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GPT2Q8TD30 523 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GJA10Q969M2 543 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PAGE5Q96GU1 130 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CEP170P1Q96L14 293 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MYADMQ96S97 322 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TRIM9Q9C026 710 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 BHMT2Q9H2M3 363 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GOLPH3LQ9H4A5 285 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RGL1Q9NZL6 768 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KIAA1468Q9P260 1216 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SEPT9Q9UHD8 586 aaPredicted RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SERTAD1Q9UHV2 236 aa9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.59□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TDRD15B5MCY1 1934 aaKnown RBP9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DOCK6Q96HP0 2047 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SETXQ7Z333 2677 aaKnown RBP9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CCDC195A0A1B0GUA6 201 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 INPPL1O15357 1258 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PAPLNO95428 1278 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CNPP09543 421 aaKnown RBP9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CCDC192P0DO97 292 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CYP11B2P19099 503 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 POU5F1BQ06416 359 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TFDP1Q14186 410 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 UBXN2BQ14CS0 331 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MLF2Q15773 248 aaPredicted RBP9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 UNC13DQ70J99 1090 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ANO5Q75V66 913 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 KCNN1Q92952 543 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 IFT74Q96LB3 600 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PPP1R16BQ96T49 567 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MTRQ99707 1265 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PRMT8Q9NR22 394 aaPredicted RBP9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 OLFML3Q9NRN5 406 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 BLOC1S4Q9NUP1 217 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZFP37Q9Y6Q3 630 aaPredicted RBP9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NUMBLQ9Y6R0 609 aa9.58□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SOBPA7XYQ1 873 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 E9PMD0 336 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NCAM2O15394 837 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MAFO75444 373 aaPredicted RBP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 C22orf31O95567 290 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 VTNP04004 478 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SSBP05455 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ADH1AP07327 375 aa9.57□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GALTP07902 379 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms