RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 ZPBP2Q6X784 338 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 PRSS33Q8NF86 280 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 SNX27Q96L92 541 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 KCNK12Q9HB15 430 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 CNTN3Q9P232 1028 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 EPS15L1Q9UBC2 864 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 ODF2LQ9ULJ1 636 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 MYH11P35749 1972 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 KMT2EQ8IZD2 1858 aa16.82■□□□□ 0.28
CCDC57-215ENST00000582100 ZDBF2Q9HCK1 2354 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 H0YCG3 227 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 HNRNPA1P09651 372 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 PDCP20941 246 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 IGFBP6P24592 240 aaPredicted RBP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 LONP1P36776 959 aaKnown RBP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 NUBP1P53384 320 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 PTPN5P54829 565 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 RAB33AQ14088 237 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 NXPE3Q969Y0 559 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 ZBTB45Q96K62 511 aaPredicted RBP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCDC57-215ENST00000582100 MTRRQ9UBK8 725 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 BACE2Q9Y5Z0 518 aa16.81■□□□□ 0.28
CCDC57-215ENST00000582100 NPHP3-ACAD11A0A0J9YXS1 232 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 ADAM12O43184 909 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 SCP2P22307 547 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 HOXA9P31269 272 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 RPL9P32969 192 aaKnown RBP16.8■□□□□ 0.28
CCDC57-215ENST00000582100 NCKAP1LP55160 1127 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 MCL1Q07820 350 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 NOLC1Q14978 699 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC57-215ENST00000582100 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
CCDC57-215ENST00000582100 UVSSAQ2YD98 709 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 LIN9Q5TKA1 542 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 ANKS3Q6ZW76 656 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 RTL10Q7L3V2 364 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 C3orf58Q8NDZ4 430 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 MYADMQ96S97 322 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 DUSP12Q9UNI6 340 aa16.8■□□□□ 0.28
CCDC57-215ENST00000582100 PODXLO00592 558 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 CLDN3O15551 220 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 C8AP07357 584 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 HARSP12081 509 aaKnown RBP16.79■□□□□ 0.28
CCDC57-215ENST00000582100 TKTP29401 623 aaKnown RBP16.79■□□□□ 0.28
CCDC57-215ENST00000582100 OR1D2P34982 312 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 BRCC3P46736 316 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 CACNB1Q02641 598 aaPredicted RBP16.79■□□□□ 0.28
CCDC57-215ENST00000582100 TCF15Q12870 199 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 SLC10A6Q3KNW5 377 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 PPM1LQ5SGD2 360 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 HAUS6Q7Z4H7 955 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 ALYREFQ86V81 257 aaKnown RBP16.79■□□□□ 0.28
CCDC57-215ENST00000582100 GPBP1Q86WP2 473 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 REEP2Q9BRK0 252 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 BLOC1S4Q9NUP1 217 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 ANKFY1Q9P2R3 1169 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 CITO14578 2027 aa16.79■□□□□ 0.28
CCDC57-215ENST00000582100 MEFVO15553 781 aaPredicted RBP16.78■□□□□ 0.28
CCDC57-215ENST00000582100 POU2F2P09086 479 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 LAMP2P13473 410 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 PLCG1P19174 1290 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 ZNF131P52739 623 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 GRIN1Q05586 938 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
CCDC57-215ENST00000582100 CCSER1Q9C0I3 900 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 CDY1Q9Y6F8 540 aa16.78■□□□□ 0.28
CCDC57-215ENST00000582100 ZFP37Q9Y6Q3 630 aaPredicted RBP16.78■□□□□ 0.28
CCDC57-215ENST00000582100 DOCK8Q8NF50 2099 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 VPS37CA5D8V6 355 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 I3L4J1 428 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 SYN3O14994 580 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 XYLBO75191 536 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 FAM13AO94988 1023 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 CLTAP09496 248 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 FSHRP23945 695 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 MRE11P49959 708 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 CLCN5P51795 746 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 DHX8Q14562 1220 aaKnown RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 MCM6Q14566 821 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 KYAT1Q16773 422 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 AXDND1Q5T1B0 1012 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 ASTLQ6HA08 431 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 GET4Q7L5D6 327 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 GRASPQ7Z6J2 395 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 MYCT1Q8N699 235 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 SLC7A14Q8TBB6 771 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 RSAD2Q8WXG1 361 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 RAD54LQ92698 747 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-215ENST00000582100 HAPLN2Q9GZV7 340 aa16.77■□□□□ 0.28
CCDC57-215ENST00000582100 IRF2BPLQ9H1B7 796 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms