RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CDC23Q9UJX2 597 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 STYXL1Q9Y6J8 313 aa10.01□□□□□ -0.81
SS18-220ENST00000582092 A0A0B4J269 797 aa10□□□□□ -0.81
SS18-220ENST00000582092 IGKV6-21A0A0C4DH24 114 aa10□□□□□ -0.81
SS18-220ENST00000582092 A6NJR5 290 aa10□□□□□ -0.81
SS18-220ENST00000582092 F8VZ95 297 aa10□□□□□ -0.81
SS18-220ENST00000582092 PJA2O43164 708 aa10□□□□□ -0.81
SS18-220ENST00000582092 LRRN2O75325 713 aa10□□□□□ -0.81
SS18-220ENST00000582092 TIMP1P01033 207 aa10□□□□□ -0.81
SS18-220ENST00000582092 TNNC2P02585 160 aa10□□□□□ -0.81
SS18-220ENST00000582092 H2AFZP0C0S5 128 aa10□□□□□ -0.81
SS18-220ENST00000582092 GNAT1P11488 350 aa10□□□□□ -0.81
SS18-220ENST00000582092 GPC3P51654 580 aa10□□□□□ -0.81
SS18-220ENST00000582092 JAM2P57087 298 aa10□□□□□ -0.81
SS18-220ENST00000582092 NLRP11P59045 1033 aaKnown RBP10□□□□□ -0.81
SS18-220ENST00000582092 BPIFB4P59827 614 aa10□□□□□ -0.81
SS18-220ENST00000582092 PTENP60484 403 aa10□□□□□ -0.81
SS18-220ENST00000582092 PURAQ00577 322 aaKnown RBP10□□□□□ -0.81
SS18-220ENST00000582092 FPGSQ05932 587 aa10□□□□□ -0.81
SS18-220ENST00000582092 PTPN11Q06124 597 aaPredicted RBP10□□□□□ -0.81
SS18-220ENST00000582092 POU5F1BQ06416 359 aa10□□□□□ -0.81
SS18-220ENST00000582092 CKAP4Q07065 602 aaKnown RBP10□□□□□ -0.81
SS18-220ENST00000582092 FAAP100Q0VG06 881 aa10□□□□□ -0.81
SS18-220ENST00000582092 PPIGQ13427 754 aaKnown RBP eCLIP10□□□□□ -0.812e-8■■■■■ 32.6
SS18-220ENST00000582092 NAB2Q15742 525 aa10□□□□□ -0.81
SS18-220ENST00000582092 WHAMMP3Q1A5X7 153 aa10□□□□□ -0.81
SS18-220ENST00000582092 LRIT3Q3SXY7 679 aa10□□□□□ -0.81
SS18-220ENST00000582092 ZNF568Q3ZCX4 644 aa10□□□□□ -0.81
SS18-220ENST00000582092 FAM47CQ5HY64 1035 aa10□□□□□ -0.81
SS18-220ENST00000582092 HGSNATQ68CP4 663 aa10□□□□□ -0.81
SS18-220ENST00000582092 CDCA2Q69YH5 1023 aaPredicted RBP10□□□□□ -0.81
SS18-220ENST00000582092 PHLDB3Q6NSJ2 640 aa10□□□□□ -0.81
SS18-220ENST00000582092 GPR153Q6NV75 609 aa10□□□□□ -0.81
SS18-220ENST00000582092 SLC39A4Q6P5W5 647 aa10□□□□□ -0.81
SS18-220ENST00000582092 ALKBH5Q6P6C2 394 aaKnown RBP10□□□□□ -0.81
SS18-220ENST00000582092 MTHFD1LQ6UB35 978 aa10□□□□□ -0.81
SS18-220ENST00000582092 MPZL3Q6UWV2 235 aa10□□□□□ -0.81
SS18-220ENST00000582092 H2AFVQ71UI9 128 aa10□□□□□ -0.81
SS18-220ENST00000582092 SV2AQ7L0J3 742 aa10□□□□□ -0.81
SS18-220ENST00000582092 TAS1R3Q7RTX0 852 aa10□□□□□ -0.81
SS18-220ENST00000582092 IRF2BP2Q7Z5L9 587 aa10□□□□□ -0.81
SS18-220ENST00000582092 TAF4BQ92750 862 aa10□□□□□ -0.81
SS18-220ENST00000582092 ZBTB45Q96K62 511 aaPredicted RBP10□□□□□ -0.81
SS18-220ENST00000582092 CGRRF1Q99675 332 aa10□□□□□ -0.81
SS18-220ENST00000582092 ACO2Q99798 780 aaKnown RBP10□□□□□ -0.81
SS18-220ENST00000582092 CARD6Q9BX69 1037 aa10□□□□□ -0.81
SS18-220ENST00000582092 IRX2Q9BZI1 471 aaPredicted RBP10□□□□□ -0.81
SS18-220ENST00000582092 L2HGDHQ9H9P8 463 aa10□□□□□ -0.81
SS18-220ENST00000582092 RPF1Q9H9Y2 349 aaKnown RBP10□□□□□ -0.81
SS18-220ENST00000582092 NOD1Q9Y239 953 aa10□□□□□ -0.81
SS18-220ENST00000582092 REXO2Q9Y3B8 237 aaKnown RBP10□□□□□ -0.81
SS18-220ENST00000582092 JRKLQ9Y4A0 524 aa10□□□□□ -0.81
SS18-220ENST00000582092 TRIP12Q14669 1992 aaPredicted RBP10□□□□□ -0.81
SS18-220ENST00000582092 A0A087X0T9 212 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 ANO9A1A5B4 782 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 CTAGE15A4D2H0 777 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 TRIM43BA6NCK2 446 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 RBAK-RBAKDNI3L0D1 243 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 FOXN3O00409 490 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 IL18RAPO95256 599 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 MOCS3O95396 460 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 C22orf31O95567 290 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 TMEM191BP0C7N4 346 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 FAM228BP0C875 321 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 CTAGE8P0CG41 777 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 PDE6CP51160 858 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 YWHAEP62258 255 aaKnown RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 DRP2Q13474 957 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 DUOXA2Q1HG44 320 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 ASTE1Q2TB18 679 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 TMEM63BQ5T3F8 832 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 CCDC181Q5TID7 509 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 MFSD5Q6N075 450 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 NFRKBQ6P4R8 1299 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 ZNF571Q7Z3V5 609 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 SRGAP1Q7Z6B7 1085 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 MTERF4Q7Z6M4 381 aaKnown RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 CTAGE6Q86UF2 777 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 ZNF410Q86VK4 478 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 CTAGE4Q8IX94 777 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 FAM126BQ8IXS8 530 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 THNSL1Q8IYQ7 743 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 SYCE1Q8N0S2 351 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 SLC43A3Q8NBI5 491 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 ZSWIM2Q8NEG5 633 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 CTNNBL1Q8WYA6 563 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 GOLGA1Q92805 767 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 TRIM43Q96BQ3 446 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 ANKRD36BP1Q96IX9 119 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 ZNF668Q96K58 619 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 AGPAT1Q99943 283 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 C16orf70Q9BSU1 422 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 GCOM2Q9BZD3 368 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 LACRTQ9GZZ8 138 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 MTIF3Q9H2K0 278 aaKnown RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 PDE11AQ9HCR9 933 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.99□□□□□ -0.81
SS18-220ENST00000582092 ARGLU1Q9NWB6 273 aaPredicted RBP9.99□□□□□ -0.81
SS18-220ENST00000582092 TRIM10Q9UDY6 481 aa9.99□□□□□ -0.81
SS18-220ENST00000582092 INTUQ9ULD6 942 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms