RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 BUB1O43683 1085 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 FAM189A1O60320 539 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 PHACTR2O75167 634 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 F2P00734 622 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 H2AFZP0C0S5 128 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 SMIM10L2AP0DMW4 78 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 SMIM10L2BP0DMW5 78 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 CYBAP13498 195 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 CPT1AP50416 773 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 AP3M2P53677 418 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 AMPD2Q01433 879 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 NCBP1Q09161 790 aaKnown RBP15.76■□□□□ 0.11
MKS1-211ENST00000581761 WHAMMP3Q1A5X7 153 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 MARCH8Q5T0T0 291 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 MFSD14CQ5VZR4 134 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 H2AFVQ71UI9 128 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 ENOSF1Q7L5Y1 443 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 THNSL1Q8IYQ7 743 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 OLIG1Q8TAK6 271 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 NLRP7Q8WX94 980 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 SHC3Q92529 594 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 KAT2BQ92831 832 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 FAM212AQ96EL1 285 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 SYT11Q9BT88 431 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.76■□□□□ 0.11
MKS1-211ENST00000581761 CDT1Q9H211 546 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 IFT122Q9HBG6 1241 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 PTPRHQ9HD43 1115 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 CPSF3Q9UKF6 684 aaKnown RBP15.76■□□□□ 0.11
MKS1-211ENST00000581761 Q9Y3F1 56 aa15.76■□□□□ 0.11
MKS1-211ENST00000581761 BTNL10A8MVZ5 291 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 TADA3O75528 432 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 CLSTN1O94985 981 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 VNN1O95497 513 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 GCNT1Q02742 428 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 NAA30Q147X3 362 aaPredicted RBP15.75■□□□□ 0.11
MKS1-211ENST00000581761 PAPD7Q5XG87 772 aaKnown RBP15.75■□□□□ 0.11
MKS1-211ENST00000581761 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 TRAPPC11Q7Z392 1133 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 ZNF410Q86VK4 478 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 CDR2LQ86X02 465 aaPredicted RBP15.75■□□□□ 0.11
MKS1-211ENST00000581761 WDR49Q8IV35 697 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 GLYCTKQ8IVS8 523 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 FAM71AQ8IYT1 594 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 KIAA0319LQ8IZA0 1049 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 CEP112Q8N8E3 955 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 OR5B17Q8NGF7 314 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 SLC30A5Q8TAD4 765 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 SLC20A1Q8WUM9 679 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 LMBR1Q8WVP7 490 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 ELMO3Q96BJ8 720 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 DEFB118Q96PH6 123 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 FAM49AQ9H0Q0 323 aaPredicted RBP15.75■□□□□ 0.11
MKS1-211ENST00000581761 HMX1Q9NP08 348 aaPredicted RBP15.75■□□□□ 0.11
MKS1-211ENST00000581761 HDAC6Q9UBN7 1215 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 SALL4Q9UJQ4 1053 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 INTUQ9ULD6 942 aa15.75■□□□□ 0.11
MKS1-211ENST00000581761 CYP26A1O43174 497 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 CSDE1O75534 798 aaKnown RBP15.74■□□□□ 0.11
MKS1-211ENST00000581761 SGPL1O95470 568 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 MCF2P10911 925 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 AKR1A1P14550 325 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 GJA8P48165 433 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 IRX5P78411 483 aaPredicted RBP15.74■□□□□ 0.11
MKS1-211ENST00000581761 BEX3Q00994 111 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 AMHR2Q16671 573 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 LHX8Q68G74 356 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 SRGAP1Q7Z6B7 1085 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
MKS1-211ENST00000581761 PDZD7Q9H5P4 517 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 RPF1Q9H9Y2 349 aaKnown RBP15.74■□□□□ 0.11
MKS1-211ENST00000581761 JRKLQ9Y4A0 524 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 SAR1BQ9Y6B6 198 aa15.74■□□□□ 0.11
MKS1-211ENST00000581761 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 TMCO5BA8MYB1 307 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 IL18RAPO95256 599 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 IQCF3P0C7M6 154 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 CYP2C9P11712 490 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 KRT5P13647 590 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 OSTNP61366 133 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 ELF2Q15723 593 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 FSCN1Q16658 493 aaKnown RBP15.73■□□□□ 0.11
MKS1-211ENST00000581761 IFI16Q16666 785 aaKnown RBP15.73■□□□□ 0.11
MKS1-211ENST00000581761 TAF3Q5VWG9 929 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 SPOPLQ6IQ16 392 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 DNAAF5Q86Y56 855 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 PPP1R13LQ8WUF5 828 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 UBXN4Q92575 508 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 DHX38Q92620 1227 aaKnown RBP15.73■□□□□ 0.11
MKS1-211ENST00000581761 CPB2Q96IY4 423 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 KATNAL1Q9BW62 490 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 CRISPLD2Q9H0B8 497 aa15.73■□□□□ 0.11
MKS1-211ENST00000581761 KAT6AQ92794 2004 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 SMIM35A0A1B0GVV1 85 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 EFCAB8A8MWE9 144 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 HAS3O00219 553 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 TSPAN1O60635 241 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 PALMO75781 387 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 ERLIN2O94905 339 aa15.72■□□□□ 0.11
MKS1-211ENST00000581761 TNNC2P02585 160 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms