RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 SMAD4Q13485 552 aaKnown RBP16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 AAK1Q2M2I8 961 aa16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 PRSS55Q6UWB4 352 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 RSPO2Q6UXX9 243 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 EPM2AIP1Q7L775 607 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 FAM84AQ96KN4 292 aa16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 TNMDQ9H2S6 317 aa16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 GDPD2Q9HCC8 539 aa16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 CPSF3Q9UKF6 684 aaKnown RBP16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 USP15Q9Y4E8 981 aaPredicted RBP16.43■□□□□ 0.22
ATPAF2-211ENST00000581698 TMEM189-UBE2V1I3L0A0 370 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 C2CD2LO14523 706 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 PPEF2O14830 753 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 HNRNPDLO14979 420 aaKnown RBP16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 KLRC4O43908 158 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 PFKFB1P16118 471 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 RPL17P18621 184 aaKnown RBP16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 C12orf76Q8N812 135 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 ACAP3Q96P50 834 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 C7orf25Q9BPX7 421 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 APOL5Q9BWW9 433 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 BLZF1Q9H2G9 400 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 PANK4Q9NVE7 773 aa16.42■□□□□ 0.22
ATPAF2-211ENST00000581698 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 LACTBL1A8MY62 500 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 OGTO15294 1046 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 CLDN3O15551 220 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 GAP43P17677 238 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 BRCC3P46736 316 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 GLUD2P49448 558 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 LIG4P49917 911 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 CUL4BQ13620 913 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 LNX1Q8TBB1 728 aaPredicted RBP16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 COLEC11Q9BWP8 271 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 SEL1LQ9UBV2 794 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 SERTAD1Q9UHV2 236 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 DOCK6Q96HP0 2047 aa16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 MTCL1Q9Y4B5 1905 aaKnown RBP16.41■□□□□ 0.22
ATPAF2-211ENST00000581698 SCN1AP35498 2009 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 CARNS1A5YM72 827 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 H0YCG3 227 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 PRPF6O94906 941 aaKnown RBP16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 PAPLNO95428 1278 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 CLTAP09496 248 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 WEE2P0C1S8 567 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 IDEP14735 1019 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 FGFR3P22607 806 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 CMA1P23946 247 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 HERC4Q5GLZ8 1057 aaPredicted RBP16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 LILRA6Q6PI73 481 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 IQUBQ8NA54 791 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 HVCN1Q96D96 273 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 CLSTN3Q9BQT9 956 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 CUEDC2Q9H467 287 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 MRPL44Q9H9J2 332 aaKnown RBP16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 KCNG1Q9UIX4 513 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 KCNH3Q9ULD8 1083 aa16.4■□□□□ 0.22
ATPAF2-211ENST00000581698 TNFRSF10AO00220 468 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 PODXLO00592 558 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 URODP06132 367 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 NFICP08651 508 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 PRR29P0C7W0 189 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 SCP2P22307 547 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 TKTP29401 623 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 ACOT2P49753 483 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 NDUFA8P51970 172 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 RIN2Q8WYP3 895 aaPredicted RBP16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 PIK3R5Q8WYR1 880 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 PPP2R3CQ969Q6 453 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 BICD1Q96G01 975 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 DDX27Q96GQ7 796 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 SPATA32Q96LK8 384 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 CBWD1Q9BRT8 395 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 MSTO1Q9BUK6 570 aa16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 MRPL17Q9NRX2 175 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 TOPORSQ9NS56 1045 aaPredicted RBP16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.21
ATPAF2-211ENST00000581698 NOTCH4Q99466 2003 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 TGFB1I1O43294 461 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 TBC1D4O60343 1298 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 GCNT3O95395 438 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 AARSP49588 968 aaKnown RBP eCLIP16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 YARSP54577 528 aaKnown RBP16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 KRT85P78386 507 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 USP41Q3LFD5 358 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 PUS10Q3MIT2 529 aaKnown RBP16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 FAM171A1Q5VUB5 890 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 JADE1Q6IE81 842 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 DCLRE1AQ6PJP8 1040 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 ADHFE1Q8IWW8 467 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 GPR65Q8IYL9 337 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 CXorf38Q8TB03 319 aa16.38■□□□□ 0.21
ATPAF2-211ENST00000581698 SCFD1Q8WVM8 642 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms