RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 CDHR5Q9HBB8 845 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 APOBEC3GQ9HC16 384 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 ACP6Q9NPH0 428 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 HDAC6Q9UBN7 1215 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 PDCD11Q14690 1871 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 MEFVO15553 781 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 CYP26A1O43174 497 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 BUB1O43683 1085 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TRPA1O75762 1119 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 SGPL1O95470 568 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 ATP1A1P05023 1023 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 MCF2P10911 925 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 APLP1P51693 650 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 GCNT1Q02742 428 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 EPS8L1Q8TE68 723 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 UMODL1Q5DID0 1318 aa15.98■□□□□ 0.15
CDK5RAP3-218ENST00000580391 FRMPD3Q5JV73 1810 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 BRCA2P51587 3418 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 SEPT4O43236 478 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TFRCP02786 760 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 NOP14P78316 857 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 AMPD2Q01433 879 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 NCOA4Q13772 614 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 WDR44Q5JSH3 913 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 GNASQ5JWF2 1037 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 CD99L2Q8TCZ2 262 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 AGPAT1Q99943 283 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 CARD6Q9BX69 1037 aa15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 SEPT11Q9NVA2 429 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-218ENST00000580391 C17orf102A2RUQ5 167 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 PHACTR2O75167 634 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TACC1O75410 805 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 CLSTN1O94985 981 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 STAG3L1P0CL83 205 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 CCND3P30281 292 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 HOXC8P31273 242 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 NAA30Q147X3 362 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 SURF1Q15526 300 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 C10orf76Q5T2E6 689 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 CXCL17Q6UXB2 119 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TRAPPC11Q7Z392 1133 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 NOP9Q86U38 636 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 SLC47A2Q86VL8 602 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 REM2Q8IYK8 340 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TRIM58Q8NG06 486 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 RPF1Q9H9Y2 349 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TAS2R14Q9NYV8 317 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■□□□□ 10.3
CDK5RAP3-218ENST00000580391 NOCTQ9UK39 431 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 V9GYY5 206 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 ATP8B3O60423 1300 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TMCO5BA8MYB1 307 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TMEM191BP0C7N4 346 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 RARBP10826 455 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TNFAIP3P21580 790 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 AP3M2P53677 418 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TFAMQ00059 246 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TAF3Q5VWG9 929 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 TMEM130Q8N3G9 435 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 C7orf31Q8N865 590 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 GCOM2Q9BZD3 368 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 NUB1Q9Y5A7 615 aa15.96■□□□□ 0.15
CDK5RAP3-218ENST00000580391 A0A1B0GUA9 196 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 B4GALT4O60513 344 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 ADAMTS4O75173 837 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CST3P01034 146 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 NFICP08651 508 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CLTAP09496 248 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 KRT5P13647 590 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CHRNB2P17787 502 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 DUOXA2Q1HG44 320 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 ENOSF1Q7L5Y1 443 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CATSPER4Q7RTX7 472 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 TMEM40Q8WWA1 233 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 ERO1AQ96HE7 468 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 NOX5Q96PH1 765 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 MTG1Q9BT17 334 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CFHR5Q9BXR6 569 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 DYNC1I1O14576 645 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 IL18RAPO95256 599 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CALCAP01258 141 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 H2AFZP0C0S5 128 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 DARSP14868 501 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 NAP1L1P55209 391 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 HTRA3P83110 453 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CUL2Q13617 745 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 H2AFVQ71UI9 128 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 ALS2CR12Q96Q35 445 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 XPNPEP3Q9NQH7 507 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 SRRDQ9UH36 339 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CDC23Q9UJX2 597 aa15.95■□□□□ 0.14
CDK5RAP3-218ENST00000580391 ANO9A1A5B4 782 aa15.94■□□□□ 0.14
CDK5RAP3-218ENST00000580391 LACTBL1A8MY62 500 aa15.94■□□□□ 0.14
CDK5RAP3-218ENST00000580391 ASS1P00966 412 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-218ENST00000580391 CYP11B1P15538 503 aa15.94■□□□□ 0.14
CDK5RAP3-218ENST00000580391 HOXA11P31270 313 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-218ENST00000580391 PDE6CP51160 858 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms