RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 WNT7AO00755 349 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 LAMTOR5O43504 91 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 KINO60870 393 aaKnown RBP19.66■□□□□ 0.74
MKS1-209ENST00000580127 PTPN2P17706 415 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 TRAPPC10P48553 1259 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 GUCY1B3Q02153 619 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 UBXN2BQ14CS0 331 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 NAB2Q15742 525 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 ZBTB41Q5SVQ8 909 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 ZNF461Q8TAF7 563 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 BSNDQ8WZ55 320 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 PPP1R10Q96QC0 940 aaKnown RBP19.66■□□□□ 0.74
MKS1-209ENST00000580127 TCHPQ9BT92 498 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 RPP25Q9BUL9 199 aaKnown RBP19.66■□□□□ 0.74
MKS1-209ENST00000580127 BHMT2Q9H2M3 363 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 SPATA6Q9NWH7 488 aaPredicted RBP19.66■□□□□ 0.74
MKS1-209ENST00000580127 DLGAP2Q9P1A6 1054 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 FBXO4Q9UKT5 387 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 LIMCH1Q9UPQ0 1083 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 DNM3Q9UQ16 869 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 TNFSF13BQ9Y275 285 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 RBM19Q9Y4C8 960 aaKnown RBP19.66■□□□□ 0.74
MKS1-209ENST00000580127 CACNA1IQ9P0X4 2223 aa19.66■□□□□ 0.74
MKS1-209ENST00000580127 FAM170BA6NMN3 283 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 PRRG1O14668 218 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 LARGE1O95461 756 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 LRG1P02750 347 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 CLCNKBP51801 687 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 UPP1Q16831 310 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 ZNF528Q3MIS6 628 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 TTC38Q5R3I4 469 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 EEF1DP3Q658K8 133 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 FAM184AQ8NB25 1140 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 ITFG1Q8TB96 612 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 ATRIPQ8WXE1 791 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 FOXQ1Q9C009 403 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 KIAA1024Q9UPX6 916 aa19.65■□□□□ 0.74
MKS1-209ENST00000580127 MYH15Q9Y2K3 1946 aa19.64■□□□□ 0.74
MKS1-209ENST00000580127 SMIM28A0A1B0GU29 152 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 ZNF197O14709 1029 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 ADAM12O43184 909 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 ECI2O75521 394 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 RPL9P32969 192 aaKnown RBP19.64■□□□□ 0.73
MKS1-209ENST00000580127 FXR2P51116 673 aaKnown RBP eCLIP19.64■□□□□ 0.73
MKS1-209ENST00000580127 HMGN5P82970 282 aaKnown RBP19.64■□□□□ 0.73
MKS1-209ENST00000580127 NT5DC1Q5TFE4 455 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 ELMOD1Q8N336 334 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 ST13P5Q8NFI4 369 aaPredicted RBP19.64■□□□□ 0.73
MKS1-209ENST00000580127 SECISBP2LQ93073 1101 aaKnown RBP19.64■□□□□ 0.73
MKS1-209ENST00000580127 DDX23Q9BUQ8 820 aaKnown RBP19.64■□□□□ 0.73
MKS1-209ENST00000580127 MRPL4Q9BYD3 311 aaKnown RBP19.64■□□□□ 0.73
MKS1-209ENST00000580127 TMEM134Q9H6X4 195 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 DNMT3BQ9UBC3 853 aaKnown RBP19.64■□□□□ 0.73
MKS1-209ENST00000580127 USP20Q9Y2K6 914 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 NUB1Q9Y5A7 615 aa19.64■□□□□ 0.73
MKS1-209ENST00000580127 TRIP11Q15643 1979 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 MIA3Q5JRA6 1907 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 GRM5P41594 1212 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 DMP1Q13316 513 aaPredicted RBP19.63■□□□□ 0.73
MKS1-209ENST00000580127 GLRA4Q5JXX5 417 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 KRT79Q5XKE5 535 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 ZNF852Q6ZMS4 543 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 NPAS3Q8IXF0 933 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 KIAA2013Q8IYS2 634 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 GPR161Q8N6U8 529 aaKnown RBP19.63■□□□□ 0.73
MKS1-209ENST00000580127 ZSCAN31Q96LW9 406 aaPredicted RBP19.63■□□□□ 0.73
MKS1-209ENST00000580127 DRC1Q96MC2 740 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 ACAP3Q96P50 834 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 KXD1Q9BQD3 176 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 C17orf75Q9HAS0 396 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 AVENQ9NQS1 362 aaPredicted RBP19.63■□□□□ 0.73
MKS1-209ENST00000580127 MAFFQ9ULX9 164 aa19.63■□□□□ 0.73
MKS1-209ENST00000580127 SYN3O14994 580 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 RHOP08100 348 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 TKTP29401 623 aaKnown RBP19.62■□□□□ 0.73
MKS1-209ENST00000580127 PUM1Q14671 1186 aaKnown RBP eCLIP19.62■□□□□ 0.73
MKS1-209ENST00000580127 ZNF568Q3ZCX4 644 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 CYP4A22Q5TCH4 519 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 SLC8B1Q6J4K2 584 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 MCRS1Q96EZ8 462 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 ACO2Q99798 780 aaKnown RBP19.62■□□□□ 0.73
MKS1-209ENST00000580127 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
MKS1-209ENST00000580127 HCFC1R1Q9NWW0 138 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 ZNF292O60281 2723 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 WDR87Q6ZQQ6 2873 aa19.62■□□□□ 0.73
MKS1-209ENST00000580127 VPS13AQ96RL7 3174 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 ARHGEF37A1IGU5 675 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 LAD1O00515 517 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 SPTLC1O15269 473 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 MCF2P10911 925 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 ATF2P15336 505 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 SDHBP21912 280 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 MARCKSP29966 332 aaPredicted RBP19.61■□□□□ 0.73
MKS1-209ENST00000580127 PEX3P56589 373 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 CSTF1Q05048 431 aaKnown RBP19.61■□□□□ 0.73
MKS1-209ENST00000580127 STRN3Q13033 797 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 TPGS2Q68CL5 300 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 IQCEQ6IPM2 695 aa19.61■□□□□ 0.73
MKS1-209ENST00000580127 APPL2Q8NEU8 664 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms