RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 AKAP5P24588 427 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 ITGB8P26012 769 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 FAM189BP81408 668 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 DUOXA2Q1HG44 320 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 FIGNQ5HY92 759 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TDRD10Q5VZ19 366 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 LMBRD2Q68DH5 695 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TMC6Q7Z403 805 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 OR5B17Q8NGF7 314 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 ZNF516Q92618 1163 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PLCB1Q9NQ66 1216 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PARP2Q9UGN5 583 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 DAAM1Q9Y4D1 1078 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TTC3P53804 2025 aa18.08■□□□□ 0.48
CDK5RAP3-215ENST00000579780 MKI67P46013 3256 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 XPOTO43592 962 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 C4BPAP04003 597 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TFAMQ00059 246 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 KCNMA1Q12791 1236 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 BIRC3Q13489 604 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TCTN1Q2MV58 587 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 AGMOQ6ZNB7 445 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 DEFB128Q7Z7B8 93 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RTN4RL1Q86UN2 441 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 C7orf61Q8IZ16 206 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 FBXL13Q8NEE6 735 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 CACTINQ8WUQ7 758 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RSPH1Q8WYR4 309 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 VWCEQ96DN2 955 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 KIF12Q96FN5 646 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RSAD1Q9HA92 442 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TMEM161AQ9NX61 479 aa18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 UBQLN1Q9UMX0 589 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.07■□□□□ 0.481e-7■■■□□ 17.2
CDK5RAP3-215ENST00000579780 TDRD15B5MCY1 1934 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-215ENST00000579780 MEIS3P2A8K0S8 358 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 GOLGA6L6A8MZA4 724 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 EFCAB14O75071 495 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 ZC3H11AO75152 810 aaKnown RBP eCLIP18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RFX1P22670 979 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 MLH1P40692 756 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PIK3CAP42336 1068 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PTPN21Q16825 1174 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TRIM65Q6PJ69 517 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TRAPPC11Q7Z392 1133 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RPUSD2Q8IZ73 545 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TAS1R2Q8TE23 839 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 LPPQ93052 612 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RPS6KC1Q96S38 1066 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PPP1R9BQ96SB3 815 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 CRACR2AQ9BSW2 395 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 NUP58Q9BVL2 599 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 LSM14BQ9BX40 385 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TTYH3Q9C0H2 523 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 INTS2Q9H0H0 1204 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 IMPACTQ9P2X3 320 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 FBXL5Q9UKA1 691 aa18.06■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RBAK-RBAKDNI3L0D1 243 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 ENPP3O14638 875 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PTGESO14684 152 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 HLA-DRAP01903 254 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TRIM21P19474 475 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 CYP3A5P20815 502 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PON1P27169 355 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 KLK7P49862 253 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 TBX2Q13207 712 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PPIGQ13427 754 aaKnown RBP eCLIP18.05■□□□□ 0.482e-14■■■■■ 28.1
CDK5RAP3-215ENST00000579780 ZBTB6Q15916 424 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 DRC7Q8IY82 874 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 BEST2Q8NFU1 509 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 LMO3Q8TAP4 145 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 FAM84AQ96KN4 292 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 PCMTD1Q96MG8 357 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 ZMAT2Q96NC0 199 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 IL23AQ9NPF7 189 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 SLC38A7Q9NVC3 462 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 RAB20Q9NX57 234 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 KLK14Q9P0G3 267 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 ITGA11Q9UKX5 1188 aa18.05■□□□□ 0.48
CDK5RAP3-215ENST00000579780 SMIM28A0A1B0GU29 152 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 ABHD14A-ACY1A0A1B0GW23 586 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 A0A1W2PQJ5 194 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 HOXA2O43364 376 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 BAIAP3O94812 1187 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 VNN1O95497 513 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 CSF2RAP15509 400 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 GRIK3Q13003 919 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 NCOA4Q13772 614 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 IKBKEQ14164 716 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 GLRA4Q5JXX5 417 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 DPY19L2P1Q6NXN4 242 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 NPAS4Q8IUM7 802 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 C1orf127Q8N9H9 656 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 EHBP1Q8NDI1 1231 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 GSTCDQ8NEC7 633 aa18.04■□□□□ 0.48
CDK5RAP3-215ENST00000579780 NEK11Q8NG66 645 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms