RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 WDR44Q5JSH3 913 aa17.45■□□□□ 0.38
IFT20-209ENST00000579419 VITQ6UXI7 678 aa17.45■□□□□ 0.38
IFT20-209ENST00000579419 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.45■□□□□ 0.38
IFT20-209ENST00000579419 MAP4K3Q8IVH8 894 aa17.45■□□□□ 0.38
IFT20-209ENST00000579419 BLIDQ8IZY5 108 aa17.45■□□□□ 0.38
IFT20-209ENST00000579419 FAM160A2Q8N612 972 aaPredicted RBP17.45■□□□□ 0.38
IFT20-209ENST00000579419 ZSWIM3Q96MP5 696 aa17.45■□□□□ 0.38
IFT20-209ENST00000579419 IER2Q9BTL4 223 aa17.45■□□□□ 0.38
IFT20-209ENST00000579419 TRMT61BQ9BVS5 477 aaKnown RBP17.45■□□□□ 0.38
IFT20-209ENST00000579419 COL4A2P08572 1712 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 ZMYM2Q9UBW7 1377 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 FGFR3P22607 806 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 CCNE1P24864 410 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 ARL2P36404 184 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 AASDHQ4L235 1098 aaPredicted RBP17.44■□□□□ 0.38
IFT20-209ENST00000579419 NCAPH2Q6IBW4 605 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 CD300LGQ6UXG3 332 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 Q6ZS52 159 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 OTUD6AQ7L8S5 288 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 DDX1Q92499 740 aaKnown RBP17.44■□□□□ 0.38
IFT20-209ENST00000579419 HAS1Q92839 578 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 AIFM3Q96NN9 605 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 ASB16Q96NS5 453 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 CORO1BQ9BR76 489 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 ZFP14Q9HCL3 533 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 AVENQ9NQS1 362 aaPredicted RBP17.44■□□□□ 0.38
IFT20-209ENST00000579419 SH3GLB2Q9NR46 395 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 USP20Q9Y2K6 914 aa17.44■□□□□ 0.38
IFT20-209ENST00000579419 VWA8A3KMH1 1905 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 C1QTNF9BB2RNN3 333 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 I3L4J1 428 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 PROS1P07225 676 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 C1QTNF9P0C862 333 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 PTPN2P17706 415 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 TKTP29401 623 aaKnown RBP17.43■□□□□ 0.38
IFT20-209ENST00000579419 VIPR2P41587 438 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 POU5F1BQ06416 359 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 PDXDC1Q6P996 788 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 LONP2Q86WA8 852 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 IRF7Q92985 503 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
IFT20-209ENST00000579419 SPEGQ15772 3267 aa17.43■□□□□ 0.38
IFT20-209ENST00000579419 WDR27A2RRH5 827 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 AXIN1O15169 862 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 MOSPD3O75425 235 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 RECQL4O94761 1208 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 THP07101 528 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 SOX9P48436 509 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 LIMK1P53667 647 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 SPIRE1Q08AE8 756 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 ELAVL2Q12926 359 aaKnown RBP17.42■□□□□ 0.38
IFT20-209ENST00000579419 PTGDRQ13258 359 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 KRT32Q14532 448 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 CEP68Q76N32 757 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 TPH2Q8IWU9 490 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 SPEM1Q8N4L4 309 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 NFKBIZQ9BYH8 718 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 ARRDC1-AS1Q9H2J1 176 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 SMOC1Q9H4F8 434 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 ZSWIM4Q9H7M6 989 aa17.42■□□□□ 0.38
IFT20-209ENST00000579419 A0A087WWV3 80 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 ARHGEF37A1IGU5 675 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 ARNTLO00327 626 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 TBX3O15119 743 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 SLITRK3O94933 977 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 LRG1P02750 347 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 HMGB1P09429 215 aaKnown RBP17.41■□□□□ 0.38
IFT20-209ENST00000579419 GJA1P17302 382 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 PSMC3P17980 439 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 BRCC3P46736 316 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 ROR1Q01973 937 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 GLRA4Q5JXX5 417 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 HS6ST3Q8IZP7 471 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 DAGLBQ8NCG7 672 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 FAM20AQ96MK3 541 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
IFT20-209ENST00000579419 POLR3FQ9H1D9 316 aaPredicted RBP17.41■□□□□ 0.38
IFT20-209ENST00000579419 PDZD7Q9H5P4 517 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 GPRC5CQ9NQ84 441 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 TRPV5Q9NQA5 729 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 ZMIZ1Q9ULJ6 1067 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 BACE2Q9Y5Z0 518 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 ZZEF1O43149 2961 aa17.41■□□□□ 0.38
IFT20-209ENST00000579419 IGF2RP11717 2491 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 B3GAT3O94766 335 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 SEC24AO95486 1093 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 EDN1P05305 212 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 PDIA3P30101 505 aaKnown RBP17.4■□□□□ 0.38
IFT20-209ENST00000579419 CNR2P34972 360 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 CLCNKBP51801 687 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 RTL10Q7L3V2 364 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 NOSTRINQ8IVI9 506 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 SMARCD2Q92925 531 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 RSPRY1Q96DX4 576 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 GOLGA2P5Q9HBQ8 144 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 KCNJ14Q9UNX9 436 aa17.4■□□□□ 0.38
IFT20-209ENST00000579419 FASNP49327 2511 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms