RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MPZL3Q6UWV2 235 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 C1orf186Q6ZWK4 172 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TAS1R3Q7RTX0 852 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RASSF8Q8NHQ8 419 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 BICD1Q96G01 975 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ACAP3Q96P50 834 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PNMA5Q96PV4 448 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TIPINQ9BVW5 301 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RHOBTB2Q9BYZ6 727 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 IRF2BPLQ9H1B7 796 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SLC38A7Q9NVC3 462 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 EPS15L1Q9UBC2 864 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CDY1Q9Y6F8 540 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ZNF318Q5VUA4 2279 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 NPHP3-ACAD11A0A0J9YXS1 232 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TMEM189-UBE2V1I3L0A0 370 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 XYLBO75191 536 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 C1RP00736 705 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PLA2G4BP0C869 781 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 LAMP2P13473 410 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PLS3P13797 630 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FGFR3P22607 806 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 GUCY2CP25092 1073 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CLCN5P51795 746 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 AXDND1Q5T1B0 1012 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 LARP1BQ659C4 914 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ANKS3Q6ZW76 656 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SLC44A3Q8N4M1 653 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SYT2Q8N9I0 419 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZBTB45Q96K62 511 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SNX27Q96L92 541 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZMAT2Q96NC0 199 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ZHX3Q9H4I2 956 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 C17orf75Q9HAS0 396 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PTPRHQ9HD43 1115 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MTRRQ9UBK8 725 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NUB1Q9Y5A7 615 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NUMBLQ9Y6R0 609 aa10.08□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PI15O43692 258 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 GFRA3O60609 400 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TOM1L1O75674 476 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HNRNPA1P09651 372 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SRFP11831 508 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 AOC1P19801 751 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PROZP22891 400 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ELF1P32519 619 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MCM4P33991 863 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 UBA7P41226 1012 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MCM2P49736 904 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NUBP1P53384 320 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SLC12A3P55017 1021 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SPAG1Q07617 926 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 RAB33AQ14088 237 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NOLC1Q14978 699 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HYIQ5T013 277 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 RSPO2Q6UXX9 243 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TMEM161BQ8NDZ6 487 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 GPR152Q8TDT2 470 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ING5Q8WYH8 240 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 C18orf25Q96B23 403 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CALML4Q96GE6 196 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HCFC1R1Q9NWW0 138 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CNTN3Q9P232 1028 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 LARSQ9P2J5 1176 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KCNG1Q9UIX4 513 aa10.07□□□□□ -0.8
CDK5RAP3-211ENST00000578996 VPS37CA5D8V6 355 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KRBA1A5PL33 1030 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 K7ENM7 598 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CLDN3O15551 220 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FAM13AO94988 1023 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 LRG1P02750 347 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 KRT18P05783 430 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CXCL8P10145 99 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NPR3P17342 541 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HOXA9P31269 272 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 LIG4P49917 911 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ROR1Q01973 937 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 HTR4Q13639 388 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 TMEM119Q4V9L6 283 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PABPC1LQ4VXU2 614 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SPECC1Q5M775 1068 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 PARM1Q6UWI2 310 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 CD300LGQ6UXG3 332 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ALKAL1Q6UXT8 129 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 GPBP1Q86WP2 473 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 MYCT1Q8N699 235 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 ITFG1Q8TB96 612 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FGF13Q92913 245 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 FGF14Q92915 247 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 NXPE3Q969Y0 559 aa10.06□□□□□ -0.8
CDK5RAP3-211ENST00000578996 AK8Q96MA6 479 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms