RNA–Protein interactions for RNA: ENST00000578386.5

SMURF2-203, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene SMURF2, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-203ENST00000578386 KRT19P08727 400 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 CCDC172P0C7W6 258 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 ZBTB48P10074 688 aaPredicted RBP11.11□□□□□ -0.63
SMURF2-203ENST00000578386 TCP1P17987 556 aaKnown RBP11.11□□□□□ -0.63
SMURF2-203ENST00000578386 MARCKSL1P49006 195 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 PDE6CP51160 858 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 CDR1P51861 262 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 ZNF200P98182 395 aaPredicted RBP11.11□□□□□ -0.63
SMURF2-203ENST00000578386 NCOA4Q13772 614 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 TRADDQ15628 312 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 MTERF4Q7Z6M4 381 aaKnown RBP11.11□□□□□ -0.63
SMURF2-203ENST00000578386 USP37Q86T82 979 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 EFCAB13Q8IY85 973 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 TXLNBQ8N3L3 684 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 CDHR5Q9HBB8 845 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
SMURF2-203ENST00000578386 MGAMO43451 1857 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 PIGRP01833 764 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 MMP3P08254 477 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 NOP14P78316 857 aaKnown RBP11.1□□□□□ -0.63
SMURF2-203ENST00000578386 TNFAIP2Q03169 654 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 CKAP4Q07065 602 aaKnown RBP11.1□□□□□ -0.63
SMURF2-203ENST00000578386 PPFIA1Q13136 1202 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 MESDQ14696 234 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 OLFML2BQ68BL8 750 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 PPTC7Q8NI37 304 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 ARFGAP3Q9NP61 516 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 ZRANB2O95218 330 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMURF2-203ENST00000578386 PAFAH1B1P43034 410 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 RAP1GAPP47736 663 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 EFNA5P52803 228 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 PTENP60484 403 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 FKBP1BP68106 108 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 C10orf76Q5T2E6 689 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 CDCA2Q69YH5 1023 aaPredicted RBP11.1□□□□□ -0.63
SMURF2-203ENST00000578386 MSANTD4Q8NCY6 345 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 RFFLQ8WZ73 363 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 TAF4BQ92750 862 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 KRT12Q99456 494 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 CDT1Q9H211 546 aa11.1□□□□□ -0.63
SMURF2-203ENST00000578386 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
SMURF2-203ENST00000578386 TRIP12Q14669 1992 aaPredicted RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ANKRD62A6NC57 917 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 TMEM253P0C7T8 217 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ITGA4P13612 1032 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 CTGFP29279 349 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 HIC1Q14526 733 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 GRIK4Q16099 956 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 DUSP28Q4G0W2 176 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 MARCH8Q5T0T0 291 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 SAPCD2Q86UD0 394 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 NT5DC3Q86UY8 548 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 DDX1Q92499 740 aaKnown RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 CYFIP2Q96F07 1278 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ABHD16BQ9H3Z7 469 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 KIAA1586Q9HCI6 787 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ACKR2O00590 384 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 OGTO15294 1046 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 MEFVO15553 781 aaPredicted RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 LDHAP00338 332 aaKnown RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 RFX1P22670 979 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 CUL2Q13617 745 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 KIAA0319LQ8IZA0 1049 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 KRT35Q92764 455 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ZNF653Q96CK0 615 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ARHGAP39Q9C0H5 1083 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ZCCHC17Q9NP64 241 aaKnown RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 POLIQ9UNA4 740 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 SLC45A1Q9Y2W3 748 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 NR2E1Q9Y466 385 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 HES2Q9Y543 173 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 TRPM7Q96QT4 1865 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 NFICP08651 508 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ARF4P18085 180 aaPredicted RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 CDH8P55286 799 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 CFAP221Q4G0U5 840 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 MPZL3Q6UWV2 235 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 ZPBP2Q6X784 338 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 GTF3C2Q8WUA4 911 aaPredicted RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 FZD8Q9H461 694 aa11.09□□□□□ -0.63
SMURF2-203ENST00000578386 CPSF3Q9UKF6 684 aaKnown RBP11.09□□□□□ -0.63
SMURF2-203ENST00000578386 HOXC6P09630 235 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 MAPK4P31152 587 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 GTF2H1P32780 548 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 TNNT3P45378 269 aaPredicted RBP11.08□□□□□ -0.64
SMURF2-203ENST00000578386 PLA2G4AP47712 749 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 CLDN10P78369 228 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 CDR2Q01850 454 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 TFDP1Q14186 410 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 BEND6Q5SZJ8 279 aaPredicted RBP11.08□□□□□ -0.64
SMURF2-203ENST00000578386 DCAF12L1Q5VU92 463 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 LMBR1Q8WVP7 490 aa11.08□□□□□ -0.64
SMURF2-203ENST00000578386 NUP85Q9BW27 656 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms