RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 RBBP8NLQ8NC74 664 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 DCPSQ96C86 337 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 CALR3Q96L12 384 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 TRAIPQ9BWF2 469 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 SHCBP1LQ9BZQ2 653 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 DDX4Q9NQI0 724 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 KLRC4O43908 158 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 NR3C2P08235 984 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 BAG6P46379 1132 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 KCNT1Q5JUK3 1230 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 LRIG3Q6UXM1 1119 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 NUDCD3Q8IVD9 361 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 AGAP3Q96P47 875 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 UNC45AQ9H3U1 944 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 ZBTB7AO95365 584 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 CALB1P05937 261 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 MAGEA4P43358 317 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 FOXD4Q12950 439 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 KDM7AQ6ZMT4 941 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 CATSPER4Q7RTX7 472 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 SLC47A2Q86VL8 602 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 ZFPM1Q8IX07 1006 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 TAAR1Q96RJ0 339 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 KLC2Q9H0B6 622 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 IP6K2Q9UHH9 426 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 CSPG5O95196 566 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 CIITAP33076 1130 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 RPS6P62753 249 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 NCOA4Q13772 614 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 RBBP5Q15291 538 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 KDELC2Q7Z4H8 507 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 WDR75Q8IWA0 830 aaKnown RBP12.74□□□□□ -0.37
ERBB2-206ENST00000578373 LRRC71Q8N4P6 559 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 CCNYL1Q8N7R7 359 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 TAS1R2Q8TE23 839 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 RAB6BQ9NRW1 208 aa12.74□□□□□ -0.37
ERBB2-206ENST00000578373 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 HSPA4LO95757 839 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 IFI35P80217 286 aaPredicted RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 JADE1Q6IE81 842 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 CYB5D1Q6P9G0 228 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 PDZD4Q76G19 769 aaPredicted RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 ATP11CQ8NB49 1132 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 SYN2Q92777 582 aaPredicted RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 FAM84AQ96KN4 292 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 JPH1Q9HDC5 661 aaPredicted RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 ANLNQ9NQW6 1124 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 KCNQ5Q9NR82 932 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 KLHL8Q9P2G9 620 aaPredicted RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 FAM86B1E9PN63 330 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 TBX3O15119 743 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 SYF2O95926 243 aaKnown RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 FAM86B2P0C5J1 330 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 RRM1P23921 792 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 SDC4P31431 198 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 ATP8B4Q8TF62 1192 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 CXorf56Q9H5V9 222 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 PARVAQ9NVD7 372 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 CST8O60676 142 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 ENO1P06733 434 aaKnown RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 ADORA2BP29275 332 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 CAV1Q03135 178 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 TFDP2Q14188 446 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 DUOXA2Q1HG44 320 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 AGBL2Q5U5Z8 902 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 C3orf62Q6ZUJ4 267 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 SIX6OS1Q8N1H7 587 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 KAT5Q92993 513 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 RMDN2Q96LZ7 410 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 VCPKMTQ9H867 229 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 TMBIM4Q9HC24 238 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 UVRAGQ9P2Y5 699 aa12.73□□□□□ -0.37
ERBB2-206ENST00000578373 HERC5Q9UII4 1024 aaKnown RBP12.73□□□□□ -0.37
ERBB2-206ENST00000578373 F8VZ95 297 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SPECC1L-ADORA2AF8WAN1 911 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 DDX3XO00571 662 aaKnown RBP eCLIP12.72□□□□□ -0.378e-8■■□□□ 13.1
ERBB2-206ENST00000578373 KRT38O76015 456 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 PRLRP16471 622 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ITIH2P19823 946 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 GPC3P51654 580 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ZNF507Q8TCN5 953 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ZSWIM1Q9BR11 485 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 HSD3B7Q9H2F3 369 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-206ENST00000578373 EML1O00423 815 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 MYBL1P10243 752 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ADRA2BP18089 450 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SFNP31947 248 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 ALDH18A1P54886 795 aaKnown RBP12.72□□□□□ -0.37
ERBB2-206ENST00000578373 STAT4Q14765 748 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
ERBB2-206ENST00000578373 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms