RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 DIS3LQ8TF46 1054 aaKnown RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 FBXL18Q96ME1 805 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 OSMRQ99650 979 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 TARS2Q9BW92 718 aaKnown RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 KLF16Q9BXK1 252 aaPredicted RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 SRRTQ9BXP5 876 aaKnown RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 TSPAN10Q9H1Z9 355 aaPredicted RBP8.74□□□□□ -1.01
COPS3-215ENST00000578317 ETNK1Q9HBU6 452 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 KIAA1586Q9HCI6 787 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 FANCLQ9NW38 375 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 CDY2AQ9Y6F7 541 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 CNTNAP2Q9UHC6 1331 aa8.74□□□□□ -1.01
COPS3-215ENST00000578317 TTC24A2A3L6 582 aaPredicted RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 TRIM49BA6NDI0 452 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 GOLGA6L3A6NEY3 463 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 ABLIM1O14639 778 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 HNRNPDLO14979 420 aaKnown RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 GPR182O15218 404 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 CLDN3O15551 220 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 TSPAN1O60635 241 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 LILRA1O75019 489 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 STAU1O95793 577 aaKnown RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 LDHAP00338 332 aaKnown RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 NR3C1P04150 777 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 EDN1P05305 212 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 NPR3P17342 541 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 EN2P19622 333 aaPredicted RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 SFPQP23246 707 aaKnown RBP eCLIP8.73□□□□□ -1.01
COPS3-215ENST00000578317 NR2F2P24468 414 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 HOXA11P31270 313 aaPredicted RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 LIG4P49917 911 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 TPM4P67936 248 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 TMEM62Q0P6H9 643 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 COL19A1Q14993 1142 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 TPD52L1Q16890 204 aaPredicted RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 FBXO47Q5MNV8 452 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 ZNF618Q5T7W0 954 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 ATF7IP2Q5U623 682 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 XXYLT1Q8NBI6 393 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 RNF214Q8ND24 703 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 CCDC51Q96ER9 411 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 BORCS6Q96GS4 357 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 ZNF668Q96K58 619 aaPredicted RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 SCLT1Q96NL6 688 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 CHST12Q9NRB3 414 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 SAMSN1Q9NSI8 373 aaKnown RBP8.73□□□□□ -1.01
COPS3-215ENST00000578317 AGPAT5Q9NUQ2 364 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 TBX21Q9UL17 535 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 GINS2Q9Y248 185 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 FRMPD3Q5JV73 1810 aa8.73□□□□□ -1.01
COPS3-215ENST00000578317 CLIC2O15247 247 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 SLC16A3O15427 465 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 PQBP1O60828 265 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 CSDE1O75534 798 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 RPS6KA5O75582 802 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 AKAP3O75969 853 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 ERLIN2O94905 339 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 SELPP16109 830 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 ARF4P18085 180 aaPredicted RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 EEF1GP26641 437 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 PSMC2P35998 433 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 SPAG1Q07617 926 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 KYAT1Q16773 422 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 TRIM60Q495X7 471 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 MPZL3Q6UWV2 235 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 CATSPER4Q7RTX7 472 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 APBB1IPQ7Z5R6 666 aaPredicted RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 FRMD5Q7Z6J6 570 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 FAM228AQ86W67 206 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 FAM114A1Q8IWE2 563 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 RGL4Q8IZJ4 473 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 BICD1Q96G01 975 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 ABHD8Q96I13 439 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 CBWD1Q9BRT8 395 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 NOC4LQ9BVI4 516 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 IKZF4Q9H2S9 585 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 METTL14Q9HCE5 456 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 HSPBP1Q9NZL4 362 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 LIMA1Q9UHB6 759 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 NOC2LQ9Y3T9 749 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 WASF2Q9Y6W5 498 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 KIAA0100Q14667 2235 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 EXTL3O43909 919 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 FAM189A1O60320 539 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 EXOC3O60645 756 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 MCF2P10911 925 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 MRE11P49959 708 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 LPIN1Q14693 890 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 LRRC26Q2I0M4 334 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 TCP11X2Q5H9J9 407 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 ARMCX5Q6P1M9 558 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 NOTUMQ6P988 496 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 SARM1Q6SZW1 724 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 LRRC8DQ7L1W4 858 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 POMGNT1Q8WZA1 660 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 ZBTB45Q96K62 511 aaPredicted RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 PPP1R16BQ96T49 567 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 TCHPQ9BT92 498 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 HAPLN2Q9GZV7 340 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms