RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ABCD1P33897 745 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 GTF2BQ00403 316 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 SLC10A6Q3KNW5 377 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 ELMSAN1Q6PJG2 1045 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 FEZF2Q8TBJ5 459 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 RHOBTB2Q9BYZ6 727 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 ZHX3Q9H4I2 956 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 PLEKHA4Q9H4M7 779 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 GOLGA2P5Q9HBQ8 144 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 TGM5O43548 720 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 RPL17P18621 184 aaKnown RBP25.09■■□□□ 1.61
VAPA-205ENST00000578314 FGFR3P22607 806 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 SEZ6Q53EL9 994 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 PDXDC1Q6P996 788 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 PRSS55Q6UWB4 352 aaPredicted RBP25.09■■□□□ 1.61
VAPA-205ENST00000578314 CYP26C1Q6V0L0 522 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.09■■□□□ 1.61
VAPA-205ENST00000578314 CCDC73Q6ZRK6 1079 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 PALB2Q86YC2 1186 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 EDAQ92838 391 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 BICD1Q96G01 975 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 ZNF396Q96N95 335 aaPredicted RBP25.09■■□□□ 1.61
VAPA-205ENST00000578314 CLSTN3Q9BQT9 956 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 ST6GALNAC4Q9H4F1 302 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 PLEKHA5Q9HAU0 1116 aa25.09■■□□□ 1.61
VAPA-205ENST00000578314 SPDYE4A6NLX3 237 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 CLTAP09496 248 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 NMT1P30419 496 aaKnown RBP25.08■■□□□ 1.61
VAPA-205ENST00000578314 LIG4P49917 911 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 STK38Q15208 465 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 SV2BQ7L1I2 683 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 CEP57Q86XR8 500 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 C3orf58Q8NDZ4 430 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 DDX12PQ92771 950 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 TFIP11Q9UBB9 837 aaKnown RBP25.08■■□□□ 1.61
VAPA-205ENST00000578314 USTQ9Y2C2 406 aa25.08■■□□□ 1.61
VAPA-205ENST00000578314 MYMKA6NI61 221 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 HNRNPDLO14979 420 aaKnown RBP25.07■■□□□ 1.6
VAPA-205ENST00000578314 SPTLC2O15270 562 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 TRAPPC3O43617 180 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 PPP6R2O75170 966 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 HSP90AA1P07900 732 aaKnown RBP25.07■■□□□ 1.6
VAPA-205ENST00000578314 RPL9P32969 192 aaKnown RBP25.07■■□□□ 1.6
VAPA-205ENST00000578314 PSMD5Q16401 504 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 KYAT1Q16773 422 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 MAP4K3Q8IVH8 894 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 TSHZ2Q9NRE2 1034 aa25.07■■□□□ 1.6
VAPA-205ENST00000578314 A0A087X0B3 334 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 CCDC195A0A1B0GUA6 201 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 C2CD4DB7Z1M9 353 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 PODXLO00592 558 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 FAM189A1O60320 539 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 SPATA31D3P0C874 917 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 ZSCAN22P10073 491 aaPredicted RBP25.06■■□□□ 1.6
VAPA-205ENST00000578314 SP100P23497 879 aaPredicted RBP25.06■■□□□ 1.6
VAPA-205ENST00000578314 MATR3P43243 847 aaKnown RBP eCLIP25.06■■□□□ 1.62e-6■■■■□ 22.8
VAPA-205ENST00000578314 ZXDAP98168 799 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 SPATA31D4Q6ZUB0 917 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 HFE2Q6ZVN8 426 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 DYMQ7RTS9 669 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 ZNF720Q7Z2F6 126 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 GLYCTKQ8IVS8 523 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 C18orf25Q96B23 403 aaPredicted RBP25.06■■□□□ 1.6
VAPA-205ENST00000578314 DNAJC19Q96DA6 116 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 PANK2Q9BZ23 570 aa25.06■■□□□ 1.6
VAPA-205ENST00000578314 A0A0B4J269 797 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 TTC26A0AVF1 554 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 YEATS4O95619 227 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 CXCL8P10145 99 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 SLC39A4Q6P5W5 647 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 ZDHHC14Q8IZN3 488 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 KREMEN2Q8NCW0 462 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 ZDHHC7Q9NXF8 308 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 SEL1LQ9UBV2 794 aa25.05■■□□□ 1.6
VAPA-205ENST00000578314 OGTO15294 1046 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 RFPL2O75678 378 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 ADRB2P07550 413 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 STAT6P42226 847 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 BRCC3P46736 316 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 ZBTB6Q15916 424 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 PTPN21Q16825 1174 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 ZC2HC1CQ53FD0 456 aaPredicted RBP25.04■■□□□ 1.6
VAPA-205ENST00000578314 SFR1Q86XK3 245 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 PLCD3Q8N3E9 789 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 ZNF707Q96C28 371 aaPredicted RBP25.04■■□□□ 1.6
VAPA-205ENST00000578314 STRA6Q9BX79 667 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 MTRRQ9UBK8 725 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 BACE2Q9Y5Z0 518 aa25.04■■□□□ 1.6
VAPA-205ENST00000578314 TECTAO75443 2155 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 ADAM12O43184 909 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 F13A1P00488 732 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 MYBP10242 640 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 GAP43P17677 238 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 TNFSF9P41273 254 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 RAB33AQ14088 237 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 FOXD4L5Q5VV16 416 aaPredicted RBP25.03■■□□□ 1.6
VAPA-205ENST00000578314 TRIM67Q6ZTA4 783 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 CCDC149Q6ZUS6 474 aa25.03■■□□□ 1.6
VAPA-205ENST00000578314 TDRD5Q8NAT2 981 aaKnown RBP25.03■■□□□ 1.6
VAPA-205ENST00000578314 FOXD4L4Q8WXT5 416 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms