RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PRPF6O94906 941 aaKnown RBP3.64□□□□□ -1.83
TOP2A-202ENST00000577541 LSSP48449 732 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 GPR15P49685 360 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 ZNF134P52741 427 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 SOX10P56693 466 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 OCRLQ01968 901 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 APBA1Q02410 837 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 ADCY2Q08462 1091 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 SEPT7Q16181 437 aaKnown RBP3.64□□□□□ -1.83
TOP2A-202ENST00000577541 MEPCEQ7L2J0 689 aaKnown RBP3.64□□□□□ -1.83
TOP2A-202ENST00000577541 C7orf31Q8N865 590 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 ZNF610Q8N9Z0 462 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 OR56A1Q8NGH5 318 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 PTCD3Q96EY7 689 aaKnown RBP3.64□□□□□ -1.83
TOP2A-202ENST00000577541 BOD1Q96IK1 185 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 NOL10Q9BSC4 688 aaKnown RBP3.64□□□□□ -1.83
TOP2A-202ENST00000577541 MTG2Q9H4K7 406 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 GALNT9Q9HCQ5 603 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 KCTD5Q9NXV2 234 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 H2AFY2Q9P0M6 372 aaPredicted RBP3.64□□□□□ -1.83
TOP2A-202ENST00000577541 WNT6Q9Y6F9 365 aa3.64□□□□□ -1.83
TOP2A-202ENST00000577541 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 CCDC78A2IDD5 438 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 ELL2O00472 640 aaPredicted RBP3.63□□□□□ -1.83
TOP2A-202ENST00000577541 ORC4O43929 436 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 KPNA6O60684 536 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 PFKMP08237 780 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 PCBP1Q15365 356 aaKnown RBP eCLIP3.63□□□□□ -1.83
TOP2A-202ENST00000577541 ZBTB41Q5SVQ8 909 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 TIGD7Q6NT04 549 aaPredicted RBP3.63□□□□□ -1.83
TOP2A-202ENST00000577541 PASD1Q8IV76 773 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 RHOT2Q8IXI1 618 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 NXPE1Q8N323 547 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 CHTF18Q8WVB6 975 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 RNF31Q96EP0 1072 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 HMCESQ96FZ2 354 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 HIST1H2AHQ96KK5 128 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 HIST1H2AJQ99878 128 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 SEMA4CQ9C0C4 833 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 TOMM22Q9NS69 142 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 ELOVL5Q9NYP7 299 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 MAPRE3Q9UPY8 281 aa3.63□□□□□ -1.83
TOP2A-202ENST00000577541 LINC01548A6NM66 108 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 DRGXA6NNA5 263 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 BPIP17213 487 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 CHN2P52757 468 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 LAMB3Q13751 1172 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 DHCR24Q15392 516 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 TERF2Q15554 542 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 TSTD2Q5T7W7 516 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 Q6ZTC4 211 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 ESPNLQ6ZVH7 1005 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 TAS1R1Q7RTX1 841 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 NEK8Q86SG6 692 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 RNF180Q86T96 592 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 SLC41A1Q8IVJ1 513 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 FAM43AQ8N2R8 423 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 ZFP28Q8NHY6 868 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 RSAD2Q8WXG1 361 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 RTF1Q92541 710 aaKnown RBP3.62□□□□□ -1.83
TOP2A-202ENST00000577541 NACC2Q96BF6 587 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 ZNF496Q96IT1 587 aaPredicted RBP3.62□□□□□ -1.83
TOP2A-202ENST00000577541 MYL10Q9BUA6 226 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 POFUT1Q9H488 388 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 KLHL11Q9NVR0 708 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 IFT57Q9NWB7 429 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 TMPRSS11EQ9UL52 423 aa3.62□□□□□ -1.83
TOP2A-202ENST00000577541 KRT86O43790 486 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 PEX1O43933 1283 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 LY86O95711 162 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 ELFN1P0C7U0 828 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 MT3P25713 68 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 LSP1P33241 339 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 ADCYAP1R1P41586 468 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 NR4A2P43354 598 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 NEK4P51957 841 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 KPNA1P52294 538 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-202ENST00000577541 CXADRP78310 365 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 TFF2Q03403 129 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 KRT81Q14533 505 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 TSHZ3Q63HK5 1081 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 THNSL2Q86YJ6 484 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 KRT78Q8N1N4 520 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 LNX2Q8N448 690 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 CDYL2Q8N8U2 506 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 OR2W6PQ8NHA6 318 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 EMC7Q9NPA0 242 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.61□□□□□ -1.83
TOP2A-202ENST00000577541 THG1LQ9NWX6 298 aaKnown RBP3.61□□□□□ -1.83
TOP2A-202ENST00000577541 NUMBLQ9Y6R0 609 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 MYPNQ86TC9 1320 aa3.61□□□□□ -1.83
TOP2A-202ENST00000577541 CCDC151A5D8V7 595 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 FKBP9O95302 570 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 FOLR3P41439 243 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 SCNN1BP51168 640 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 MANFP55145 182 aaKnown RBP3.6□□□□□ -1.83
TOP2A-202ENST00000577541 ZNF782Q6ZMW2 699 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-202ENST00000577541 FKBP9P1Q75LS8 142 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 AMIGO2Q86SJ2 522 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 LYSMD2Q8IV50 215 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms