RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FAM126AQ9BYI3 521 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 FZD8Q9H461 694 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 BRD9Q9H8M2 597 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 ANKEF1Q9NU02 776 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 GDE1Q9NZC3 331 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 MTRRQ9UBK8 725 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 RAB23Q9ULC3 237 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 VWA8A3KMH1 1905 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 F5P12259 2224 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 LRRIQ4A6NIV6 560 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 MAN2B1O00754 1011 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 SLC30A4O14863 429 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 HRO43593 1189 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 RECQL4O94761 1208 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 B3GAT3O94766 335 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 BAG4O95429 457 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 POU2F2P09086 479 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 GCFC2P16383 781 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 FCARP24071 287 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 TKTP29401 623 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 BRCC3P46736 316 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 RARRES1P49788 294 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 CLCNKBP51801 687 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 NRLP54845 237 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 DMWDQ09019 674 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 ELAVL2Q12926 359 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 SRSF5Q13243 272 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 FAM78AQ5JUQ0 283 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 GLRA4Q5JXX5 417 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 PDXDC1Q6P996 788 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 NETO1Q8TDF5 533 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 FAM3CQ92520 227 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 ZSWIM3Q96MP5 696 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 TRMT61BQ9BVS5 477 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 CHRDQ9H2X0 955 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 PDZD7Q9H5P4 517 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 ZFP14Q9HCL3 533 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 SEMA4GQ9NTN9 838 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 PCDHA12Q9UN75 941 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
NPLOC4-220ENST00000576940 ARID2Q68CP9 1835 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 USO1O60763 962 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 LYPLA2O95372 231 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 EDN1P05305 212 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 RETP07949 1114 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 LIG1P18858 919 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 KCNA4P22459 653 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 GDI1P31150 447 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 HOXC13P31276 330 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 CCR2P41597 374 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 CXCL12P48061 93 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 ARPP19P56211 112 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 SATB1Q01826 763 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 SIM2Q14190 667 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 GAS6Q14393 721 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 PRSS36Q5K4E3 855 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 EEF1DP3Q658K8 133 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 LAIR1Q6GTX8 287 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 PPP4R3CPQ6ZMV5 832 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 RUFY3Q7L099 469 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 SLFN12Q8IYM2 578 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 ZNF461Q8TAF7 563 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 DNASE1L2Q92874 299 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 ZNF274Q96GC6 653 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 CORO1BQ9BR76 489 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 GOLGA2P5Q9HBQ8 144 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 ZNF334Q9HCZ1 680 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 BACE2Q9Y5Z0 518 aa11.17□□□□□ -0.62
NPLOC4-220ENST00000576940 ZMYM2Q9UBW7 1377 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 WDR27A2RRH5 827 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 CHURC1-FNTBB4DL54 471 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 ABLIM3O94929 683 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 SEC24AO95486 1093 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 LRG1P02750 347 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 CHRNB1P11230 501 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 GJA1P17302 382 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 CCNE1P24864 410 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 ELF1P32519 619 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 VIPR2P41587 438 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 TXKP42681 527 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 FNTBP49356 437 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 ROR1Q01973 937 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 PRPF4BQ13523 1007 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 FAM187BQ17R55 369 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 VITQ6UXI7 678 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 RTL10Q7L3V2 364 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 MAP4K3Q8IVH8 894 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 C3orf58Q8NDZ4 430 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 BSNDQ8WZ55 320 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 IRF7Q92985 503 aa11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 DDX27Q96GQ7 796 aaKnown RBP11.16□□□□□ -0.62
NPLOC4-220ENST00000576940 PRIMPOLQ96LW4 560 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms