RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 RXFP1Q9HBX9 757 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.8□□□□□ -0.04
CIITA-210ENST00000575513 TBC1D7Q9P0N9 293 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 CLEC1BQ9P126 229 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 SERTAD1Q9UHV2 236 aa14.8□□□□□ -0.04
CIITA-210ENST00000575513 CPSF3Q9UKF6 684 aaKnown RBP14.8□□□□□ -0.04
CIITA-210ENST00000575513 SF3B1O75533 1304 aaKnown RBP eCLIP14.8□□□□□ -0.04
CIITA-210ENST00000575513 VCANP13611 3396 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 KIAA0391O15091 583 aaKnown RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 LINC01565O15544 149 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 MEFVO15553 781 aaPredicted RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 TRAPPC3O43617 180 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 TBX10O75333 385 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 GLP2RO95838 553 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 LDHAP00338 332 aaKnown RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 MYBP10242 640 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 GARTP22102 1010 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 ADSSP30520 456 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 GLUD2P49448 558 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 KCNQ1P51787 676 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 CASP5P51878 434 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 SNRPFP62306 86 aaKnown RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 CREMQ03060 361 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 PPP2R3AQ06190 1150 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 DLX2Q07687 328 aaPredicted RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 KCNA1Q09470 495 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 ZBTB6Q15916 424 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 ENOX2Q16206 610 aaKnown RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 GLRA4Q5JXX5 417 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 KIAA1841Q6NSI8 718 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 PDXDC1Q6P996 788 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 EP400NLQ6ZTU2 488 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 EPM2AIP1Q7L775 607 aaPredicted RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 TAS1R1Q7RTX1 841 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 ZNF507Q8TCN5 953 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 CASP10Q92851 521 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 GPR62Q9BZJ7 368 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 ASB7Q9H672 318 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 CD207Q9UJ71 328 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 AGO2Q9UKV8 859 aaKnown RBP14.79□□□□□ -0.04
CIITA-210ENST00000575513 DERAQ9Y315 318 aa14.79□□□□□ -0.04
CIITA-210ENST00000575513 F8W810 466 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 H3BQ06 376 aaPredicted RBP14.78□□□□□ -0.04
CIITA-210ENST00000575513 XPOTO43592 962 aaKnown RBP14.78□□□□□ -0.04
CIITA-210ENST00000575513 B3GAT3O94766 335 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 KIF4AO95239 1232 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 CXCL8P10145 99 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 AFMP43652 599 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 CLCNKBP51801 687 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 NDUFA8P51970 172 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 PSMD2Q13200 908 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 SMAD4Q13485 552 aaKnown RBP14.78□□□□□ -0.04
CIITA-210ENST00000575513 CUL4BQ13620 913 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 SEZ6Q53EL9 994 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 FAM26FQ5R3K3 315 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 PTCRAQ6ISU1 281 aaPredicted RBP14.78□□□□□ -0.04
CIITA-210ENST00000575513 SYCP3Q8IZU3 236 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 SMRP1Q8NCR6 262 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 VN1R2Q8NFZ6 395 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 AUTS2Q8WXX7 1259 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 POMGNT1Q8WZA1 660 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 CCDC34Q96HJ3 373 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 KLHL5Q96PQ7 755 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 TTPALQ9BTX7 342 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 FNIP2Q9P278 1114 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 UBQLN1Q9UMX0 589 aaKnown RBP14.78□□□□□ -0.04
CIITA-210ENST00000575513 HCFC2Q9Y5Z7 792 aa14.78□□□□□ -0.04
CIITA-210ENST00000575513 UBE4BO95155 1302 aa14.77□□□□□ -0.04
CIITA-210ENST00000575513 GOLGA6L4A6NEF3 574 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 LACTBL1A8MY62 500 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 PRPF6O94906 941 aaKnown RBP14.77□□□□□ -0.05
CIITA-210ENST00000575513 ADH1AP07327 375 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 CNPP09543 421 aaKnown RBP14.77□□□□□ -0.05
CIITA-210ENST00000575513 PAX3P23760 479 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 TNFSF9P41273 254 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 SOX4Q06945 474 aaPredicted RBP14.77□□□□□ -0.05
CIITA-210ENST00000575513 SMAD2Q15796 467 aaKnown RBP14.77□□□□□ -0.05
CIITA-210ENST00000575513 ANKRD54Q6NXT1 300 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 KANK3Q6NY19 840 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 CD300LGQ6UXG3 332 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 NT5DC4Q86YG4 428 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 FSIP1Q8NA03 581 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 ADAMTS19Q8TE59 1207 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 SLC22A17Q8WUG5 538 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 RABGGTAQ92696 567 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 COL25A1Q9BXS0 654 aaPredicted RBP14.77□□□□□ -0.05
CIITA-210ENST00000575513 FGFBP2Q9BYJ0 223 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 BLZF1Q9H2G9 400 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 GDPD2Q9HCC8 539 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 DZANK1Q9NVP4 752 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 CGNQ9P2M7 1197 aaKnown RBP14.77□□□□□ -0.05
CIITA-210ENST00000575513 PRKAG3Q9UGI9 489 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 DPP7Q9UHL4 492 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 C2CD2Q9Y426 696 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 TTC28Q96AY4 2481 aa14.77□□□□□ -0.05
CIITA-210ENST00000575513 TDRD15B5MCY1 1934 aaKnown RBP14.76□□□□□ -0.05
CIITA-210ENST00000575513 TISP43B9A030 160 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 PODXLO00592 558 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 ZNF202O95125 648 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 IL18RAPO95256 599 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms