RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 FBXO18Q8NFZ0 1043 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 RAB34Q9BZG1 259 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
TVP23B-208ENST00000575261 DDX19AQ9NUU7 478 aaKnown RBP11.48□□□□□ -0.57
TVP23B-208ENST00000575261 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 KCNH3Q9ULD8 1083 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 TNFSF13BQ9Y275 285 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 CDY1Q9Y6F8 540 aa11.48□□□□□ -0.57
TVP23B-208ENST00000575261 TRIP11Q15643 1979 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 K7ERI5 159 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 TKTP29401 623 aaKnown RBP11.47□□□□□ -0.57
TVP23B-208ENST00000575261 GRM5P41594 1212 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 YARSP54577 528 aaKnown RBP11.47□□□□□ -0.57
TVP23B-208ENST00000575261 STARD6P59095 220 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 GPC5P78333 572 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 PFKPQ01813 784 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
TVP23B-208ENST00000575261 ECM1Q16610 540 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 ZNF568Q3ZCX4 644 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 C1orf210Q8IVY1 113 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 CEP120Q8N960 986 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 C3orf58Q8NDZ4 430 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 ITFG1Q8TB96 612 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 KCNG4Q8TDN1 519 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 DDX27Q96GQ7 796 aaKnown RBP11.47□□□□□ -0.57
TVP23B-208ENST00000575261 RPP25Q9BUL9 199 aaKnown RBP11.47□□□□□ -0.57
TVP23B-208ENST00000575261 CCDC94Q9BW85 323 aaPredicted RBP11.47□□□□□ -0.57
TVP23B-208ENST00000575261 MRPL4Q9BYD3 311 aaKnown RBP11.47□□□□□ -0.57
TVP23B-208ENST00000575261 FOXQ1Q9C009 403 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 GOLGA2P5Q9HBQ8 144 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 PPP4R2Q9NY27 417 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 DLGAP2Q9P1A6 1054 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 KIAA1024Q9UPX6 916 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 BACE2Q9Y5Z0 518 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 R4GN57 208 aa11.47□□□□□ -0.57
TVP23B-208ENST00000575261 CCDC169A6NNP5 214 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 KCNA4P22459 653 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 NPTX2P47972 431 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 PEX3P56589 373 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 PRKCQQ04759 706 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 SNW1Q13573 536 aaKnown RBP11.46□□□□□ -0.57
TVP23B-208ENST00000575261 NBR1Q14596 966 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 MLF2Q15773 248 aaPredicted RBP11.46□□□□□ -0.57
TVP23B-208ENST00000575261 RSPO2Q6UXX9 243 aaPredicted RBP11.46□□□□□ -0.57
TVP23B-208ENST00000575261 NPAS3Q8IXF0 933 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 IGSF22Q8N9C0 903 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 DRC1Q96MC2 740 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 ACO2Q99798 780 aaKnown RBP11.46□□□□□ -0.57
TVP23B-208ENST00000575261 CDT1Q9H211 546 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 POLD4Q9HCU8 107 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
TVP23B-208ENST00000575261 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 ARHGAP28Q9P2N2 729 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 MRPS23Q9Y3D9 190 aaKnown RBP11.46□□□□□ -0.57
TVP23B-208ENST00000575261 CITO14578 2027 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 FANCMQ8IYD8 2048 aa11.46□□□□□ -0.57
TVP23B-208ENST00000575261 PATJQ8NI35 1801 aa11.46□□□□□ -0.58
TVP23B-208ENST00000575261 NOTCH4Q99466 2003 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 OTOGLQ3ZCN5 2332 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 SMIM28A0A1B0GU29 152 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 KANSL1LA0AUZ9 987 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 I3L4J1 428 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 LAD1O00515 517 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 PODXLO00592 558 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 SYN3O14994 580 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 HIP1RO75146 1068 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 LRG1P02750 347 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 SP9P0CG40 484 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 BRCC3P46736 316 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 ID4P47928 161 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 OSTNP61366 133 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 ROR1Q01973 937 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 SOX4Q06945 474 aaPredicted RBP11.45□□□□□ -0.58
TVP23B-208ENST00000575261 PDIA5Q14554 519 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 XKR4Q5GH76 650 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
TVP23B-208ENST00000575261 KRT79Q5XKE5 535 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 SLC8B1Q6J4K2 584 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 ERMP1Q7Z2K6 904 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 C4orf32Q8N8J7 132 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 ING5Q8WYH8 240 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 ZSCAN31Q96LW9 406 aaPredicted RBP11.45□□□□□ -0.58
TVP23B-208ENST00000575261 KXD1Q9BQD3 176 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 DDX23Q9BUQ8 820 aaKnown RBP11.45□□□□□ -0.58
TVP23B-208ENST00000575261 BCO2Q9BYV7 579 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 C17orf75Q9HAS0 396 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 PTPRHQ9HD43 1115 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 KMT5AQ9NQR1 393 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 GDE1Q9NZC3 331 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 DNMT3BQ9UBC3 853 aaKnown RBP11.45□□□□□ -0.58
TVP23B-208ENST00000575261 DNM3Q9UQ16 869 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 COL4A3Q01955 1670 aa11.45□□□□□ -0.58
TVP23B-208ENST00000575261 WDR27A2RRH5 827 aa11.44□□□□□ -0.58
TVP23B-208ENST00000575261 E9PMD0 336 aa11.44□□□□□ -0.58
TVP23B-208ENST00000575261 PRRG1O14668 218 aa11.44□□□□□ -0.58
TVP23B-208ENST00000575261 SEC24BO95487 1268 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms