RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TRIM7Q9C029 511 aa25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 GTF3C4Q9UKN8 822 aa25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 MTA2O94776 668 aa25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 POU5F1Q01860 360 aaKnown RBP25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 LAMTOR4Q0VGL1 99 aa25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 GJC2Q5T442 439 aaPredicted RBP25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 RNF149Q8NC42 400 aa25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 CGRRF1Q99675 332 aa25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 CNOT8Q9UFF9 292 aaKnown RBP25.37■■□□□ 1.65
NPLOC4-217ENST00000574897 BHMG1C9JSJ3 638 aaPredicted RBP25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 DAPK3O43293 454 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 ACO1P21399 889 aaKnown RBP25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 NNTQ13423 1086 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 PLCB4Q15147 1175 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 ENOSF1Q7L5Y1 443 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 DHX37Q8IY37 1157 aaKnown RBP25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 BBXQ8WY36 941 aaPredicted RBP25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 NUB1Q9Y5A7 615 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 ANK1P16157 1881 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 CLDN3O15551 220 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 PEX5P50542 639 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 CCDC62Q6P9F0 684 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 ZDHHC14Q8IZN3 488 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 PIK3R5Q8WYR1 880 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 TCHPQ9BT92 498 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 CCDC113Q9H0I3 377 aa25.36■■□□□ 1.65
NPLOC4-217ENST00000574897 KIAA0391O15091 583 aaKnown RBP25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 FAM189A1O60320 539 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 LGR5O75473 907 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 LDHAP00338 332 aaKnown RBP25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 UNGP13051 313 aaPredicted RBP25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 OSBPP22059 807 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 USP50Q70EL3 339 aaPredicted RBP25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 CDR2LQ86X02 465 aaPredicted RBP25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 CD101Q93033 1021 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 ARL8AQ96BM9 186 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 TRIM31Q9BZY9 425 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 DPH5Q9H2P9 285 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 SLITRK6Q9H5Y7 841 aa25.35■■□□□ 1.65
NPLOC4-217ENST00000574897 TXNP10599 105 aaKnown RBP25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 CUL2Q13617 745 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 LLGL1Q15334 1064 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 PASD1Q8IV76 773 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 ATP8B4Q8TF62 1192 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 FAM212AQ96EL1 285 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 DIS3Q9Y2L1 958 aaKnown RBP25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 HSF2BPO75031 334 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 PYGMP11217 842 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 FLT3P36888 993 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 IER5Q5VY09 327 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 TMEM270Q6UE05 265 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 RHPN2Q8IUC4 686 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 FAM167AQ96KS9 214 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 SH3GL2Q99962 352 aa25.34■■□□□ 1.65
NPLOC4-217ENST00000574897 TCRBV7S2A1N4TA0A589 114 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 MIF4GDA9UHW6 222 aaKnown RBP25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 SPOPO43791 374 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 CST3P01034 146 aaPredicted RBP25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 KRT14P02533 472 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 NOP14P78316 857 aaKnown RBP25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 DPY19L2Q6NUT2 758 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 FASTKD5Q7L8L6 764 aaKnown RBP25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 UBL4BQ8N7F7 174 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 CYFIP2Q96F07 1278 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 RPS6KC1Q96S38 1066 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 PSD3Q9NYI0 1048 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 PCDHB4Q9Y5E5 795 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 PCDHB2Q9Y5E7 798 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 PRKCBP05771 671 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 PTENP60484 403 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 IQCKQ8N0W5 287 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 WHAMMQ8TF30 809 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 ACO2Q99798 780 aaKnown RBP25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 PLXNB2O15031 1838 aa25.33■■□□□ 1.65
NPLOC4-217ENST00000574897 RRM1P23921 792 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 TTMPQ5BVD1 217 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 CCDC26Q8TAB7 109 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 L3MBTL3Q96JM7 780 aaPredicted RBP25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 NLRP4Q96MN2 994 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 MPHOSPH6Q99547 160 aaKnown RBP25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 MRPL4Q9BYD3 311 aaKnown RBP25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 CLTAP09496 248 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 CLCN3P51790 818 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 MKRN3Q13064 507 aaKnown RBP25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 NCOA4Q13772 614 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 DAB2IPQ5VWQ8 1189 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 ALS2CLQ60I27 953 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 CDCA2Q69YH5 1023 aaPredicted RBP25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 ZPBP2Q6X784 338 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 BRSK2Q8IWQ3 736 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 MCOLN2Q8IZK6 566 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 MTMR12Q9C0I1 747 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 ZNF408Q9H9D4 720 aa25.32■■□□□ 1.64
NPLOC4-217ENST00000574897 MROH7Q68CQ1 1323 aa25.31■■□□□ 1.64
NPLOC4-217ENST00000574897 IGKV6-21A0A0C4DH24 114 aa25.31■■□□□ 1.64
NPLOC4-217ENST00000574897 B4GALT5O43286 388 aa25.31■■□□□ 1.64
NPLOC4-217ENST00000574897 TOM1L1O75674 476 aa25.31■■□□□ 1.64
NPLOC4-217ENST00000574897 CFAP58Q5T655 872 aa25.31■■□□□ 1.64
NPLOC4-217ENST00000574897 MAATS1Q7Z4T9 603 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms