RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 GRM5P41594 1212 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 BRCC3P46736 316 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 YARSP54577 528 aaKnown RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 SOX4Q06945 474 aaPredicted RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 UVSSAQ2YD98 709 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 ZNF568Q3ZCX4 644 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 RINT1Q6NUQ1 792 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 PARM1Q6UWI2 310 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 C1orf186Q6ZWK4 172 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 TAS1R3Q7RTX0 852 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 ITFG1Q8TB96 612 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 SLC7A14Q8TBB6 771 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 UROC1Q96N76 676 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 TCHPQ9BT92 498 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 MMTAG2Q9BU76 263 aaKnown RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 CCDC94Q9BW85 323 aaPredicted RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 MRPL4Q9BYD3 311 aaKnown RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 CDT1Q9H211 546 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 MTRRQ9UBK8 725 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 CDH7Q9ULB5 785 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 CDY1Q9Y6F8 540 aa16.7■□□□□ 0.26
CTNS-209ENST00000574776 ZFP37Q9Y6Q3 630 aaPredicted RBP16.7■□□□□ 0.26
CTNS-209ENST00000574776 TRAPPC3O43617 180 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 XYLBO75191 536 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 HOXA9P31269 272 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 PRPHP41219 470 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 MAPK7Q13164 816 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 DMP1Q13316 513 aaPredicted RBP16.69■□□□□ 0.26
CTNS-209ENST00000574776 ANGPT1Q15389 498 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 XKR4Q5GH76 650 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 MCTP1Q6DN14 999 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 C3orf58Q8NDZ4 430 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 FGF13Q92913 245 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 FGF14Q92915 247 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 DRC1Q96MC2 740 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 ZMAT2Q96NC0 199 aaKnown RBP16.69■□□□□ 0.26
CTNS-209ENST00000574776 TBC1D17Q9HA65 648 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 TOPORSQ9NS56 1045 aaPredicted RBP16.69■□□□□ 0.26
CTNS-209ENST00000574776 HCFC1R1Q9NWW0 138 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 ARHGAP28Q9P2N2 729 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
CTNS-209ENST00000574776 BACE2Q9Y5Z0 518 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 PHLPP2Q6ZVD8 1323 aa16.69■□□□□ 0.26
CTNS-209ENST00000574776 CFAP54Q96N23 3096 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 PRR23AA6NEV1 266 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 SLC16A4O15374 487 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 GPC5P78333 572 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 ANKS3Q6ZW76 656 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 NKD2Q969F2 451 aaPredicted RBP16.68■□□□□ 0.26
CTNS-209ENST00000574776 DDX27Q96GQ7 796 aaKnown RBP16.68■□□□□ 0.26
CTNS-209ENST00000574776 ZBTB45Q96K62 511 aaPredicted RBP16.68■□□□□ 0.26
CTNS-209ENST00000574776 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 PLIN2Q99541 437 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 SLC2A4RGQ9NR83 387 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 DNMT3BQ9UBC3 853 aaKnown RBP16.68■□□□□ 0.26
CTNS-209ENST00000574776 FAM186AA6NE01 2351 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 DMDP11532 3685 aa16.68■□□□□ 0.26
CTNS-209ENST00000574776 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
CTNS-209ENST00000574776 MCF2P10911 925 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 HARSP12081 509 aaKnown RBP16.67■□□□□ 0.26
CTNS-209ENST00000574776 PROZP22891 400 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 PHLDB3Q6NSJ2 640 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 NTPCRQ9BSD7 190 aaKnown RBP16.67■□□□□ 0.26
CTNS-209ENST00000574776 C17orf75Q9HAS0 396 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 ARHGEF3Q9NR81 526 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 SLC38A7Q9NVC3 462 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 SIT1Q9Y3P8 196 aa16.67■□□□□ 0.26
CTNS-209ENST00000574776 PODXLO00592 558 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 ABLIM1O14639 778 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 KCNE1P15382 129 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 ARPP19P56211 112 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 PABPC1LQ4VXU2 614 aaKnown RBP16.66■□□□□ 0.26
CTNS-209ENST00000574776 RILPL1Q5EBL4 403 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 VARS2Q5ST30 1063 aaKnown RBP16.66■□□□□ 0.26
CTNS-209ENST00000574776 MPZL3Q6UWV2 235 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 RTL10Q7L3V2 364 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
CTNS-209ENST00000574776 SNX27Q96L92 541 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 NOTCH4Q99466 2003 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 VPS13AQ96RL7 3174 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
CTNS-209ENST00000574776 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
CTNS-209ENST00000574776 POU2F2P09086 479 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 GUCY2CP25092 1073 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 ATP2C1P98194 919 aaPredicted RBP16.65■□□□□ 0.26
CTNS-209ENST00000574776 STRN3Q13033 797 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
CTNS-209ENST00000574776 SEZ6Q53EL9 994 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 MTSS1LQ765P7 747 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 SYT2Q8N9I0 419 aaPredicted RBP16.65■□□□□ 0.26
CTNS-209ENST00000574776 ZNF461Q8TAF7 563 aa16.65■□□□□ 0.26
CTNS-209ENST00000574776 SPIRE2Q8WWL2 714 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms