RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 SEZ6Q53EL9 994 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 PALB2Q86YC2 1186 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 ANKFY1Q9P2R3 1169 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 CCDC39Q9UFE4 941 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 USTQ9Y2C2 406 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 NR2E1Q9Y466 385 aa21.53■■□□□ 1.04
SCARF1-208ENST00000574545 MTCL1Q9Y4B5 1905 aaKnown RBP21.53■■□□□ 1.04
SCARF1-208ENST00000574545 MYO10Q9HD67 2058 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 A0A087X0B3 334 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 HARSP12081 509 aaKnown RBP21.52■■□□□ 1.04
SCARF1-208ENST00000574545 NMT1P30419 496 aaKnown RBP21.52■■□□□ 1.04
SCARF1-208ENST00000574545 ZXDAP98168 799 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 CREMQ03060 361 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 SLC39A4Q6P5W5 647 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.52■■□□□ 1.04
SCARF1-208ENST00000574545 KRI1Q8N9T8 703 aaKnown RBP21.52■■□□□ 1.04
SCARF1-208ENST00000574545 ZNF707Q96C28 371 aaPredicted RBP21.52■■□□□ 1.04
SCARF1-208ENST00000574545 DNAJC19Q96DA6 116 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 ST6GALNAC4Q9H4F1 302 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 PLEKHA4Q9H4M7 779 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 SLC38A7Q9NVC3 462 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 DPP7Q9UHL4 492 aa21.52■■□□□ 1.04
SCARF1-208ENST00000574545 C2orf16Q68DN1 1984 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 MYMKA6NI61 221 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 K7ENM7 598 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 RFPL2O75678 378 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 KRT18P05783 430 aaKnown RBP21.51■■□□□ 1.03
SCARF1-208ENST00000574545 SPATA31D3P0C874 917 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 SP100P23497 879 aaPredicted RBP21.51■■□□□ 1.03
SCARF1-208ENST00000574545 RRAGBQ5VZM2 374 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 CYP26C1Q6V0L0 522 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 SPATA31D4Q6ZUB0 917 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 CEP57Q86XR8 500 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 MAP4K3Q8IVH8 894 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 GLYCTKQ8IVS8 523 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 HSCBQ8IWL3 235 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 DDX27Q96GQ7 796 aaKnown RBP21.51■■□□□ 1.03
SCARF1-208ENST00000574545 STRA6Q9BX79 667 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 DENND4AQ7Z401 1863 aa21.51■■□□□ 1.03
SCARF1-208ENST00000574545 CCDC195A0A1B0GUA6 201 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 TTC26A0AVF1 554 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 ADAM12O43184 909 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 PPP6R2O75170 966 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 ADRB2P07550 413 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 CLTAP09496 248 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 BRCC3P46736 316 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 ZBTB6Q15916 424 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 PSMD5Q16401 504 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 DYMQ7RTS9 669 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 ZNF720Q7Z2F6 126 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 ZDHHC14Q8IZN3 488 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 DDX12PQ92771 950 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 C18orf25Q96B23 403 aaPredicted RBP21.5■■□□□ 1.03
SCARF1-208ENST00000574545 PLEKHA5Q9HAU0 1116 aa21.5■■□□□ 1.03
SCARF1-208ENST00000574545 TFIP11Q9UBB9 837 aaKnown RBP21.5■■□□□ 1.03
SCARF1-208ENST00000574545 PODXLO00592 558 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 TBCAO75347 108 aaKnown RBP21.49■■□□□ 1.03
SCARF1-208ENST00000574545 PPP1R37O75864 691 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 CXCL8P10145 99 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 MYBP10242 640 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 PDIA4P13667 645 aaKnown RBP21.49■■□□□ 1.03
SCARF1-208ENST00000574545 RPL9P32969 192 aaKnown RBP21.49■■□□□ 1.03
SCARF1-208ENST00000574545 TNFSF9P41273 254 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 LIG4P49917 911 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 PTPN21Q16825 1174 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 ZC2HC1CQ53FD0 456 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-208ENST00000574545 ZBTB41Q5SVQ8 909 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 PDXDC1Q6P996 788 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 RSPO2Q6UXX9 243 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-208ENST00000574545 CCDC73Q6ZRK6 1079 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 TRIM67Q6ZTA4 783 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 SV2BQ7L1I2 683 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 KREMEN2Q8NCW0 462 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 BICD1Q96G01 975 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 ZHX3Q9H4I2 956 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 TSHZ2Q9NRE2 1034 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 MTRRQ9UBK8 725 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 FBXW11Q9UKB1 542 aa21.49■■□□□ 1.03
SCARF1-208ENST00000574545 PDCD11Q14690 1871 aaKnown RBP21.48■■□□□ 1.03
SCARF1-208ENST00000574545 A0A0B4J269 797 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 ANKRD63C9JTQ0 380 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 I3L4J1 428 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 HNRNPDLO14979 420 aaKnown RBP21.48■■□□□ 1.03
SCARF1-208ENST00000574545 SPTLC2O15270 562 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 ZSCAN22P10073 491 aaPredicted RBP21.48■■□□□ 1.03
SCARF1-208ENST00000574545 TKTP29401 623 aaKnown RBP21.48■■□□□ 1.03
SCARF1-208ENST00000574545 ABCD1P33897 745 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 TXLNAP40222 546 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 RAB33AQ14088 237 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 STK38Q15208 465 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 BMP8AQ7Z5Y6 402 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 WDR6Q9NNW5 1121 aaKnown RBP21.48■■□□□ 1.03
SCARF1-208ENST00000574545 ZDHHC7Q9NXF8 308 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 BACE2Q9Y5Z0 518 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 STYXL1Q9Y6J8 313 aa21.48■■□□□ 1.03
SCARF1-208ENST00000574545 FRMD3A2A2Y4 597 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 SPDYE4A6NLX3 237 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 OGTO15294 1046 aa21.47■■□□□ 1.03
SCARF1-208ENST00000574545 TRAPPC3O43617 180 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms