RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 NDNQ99608 321 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 TIPINQ9BVW5 301 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 TRAIPQ9BWF2 469 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 TRABDQ9H4I3 376 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 CCDC87Q9NVE4 849 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 EURLQ9NYK6 297 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 ACTL7BQ9Y614 415 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 SPATA31A1Q5TZJ5 1347 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 ZMYM2Q9UBW7 1377 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 SPATA31C1P0DKV0 1188 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 KRT15P19012 456 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 RXRBP28702 533 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 NEK3P51956 506 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 MCL1Q07820 350 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 PKN2Q16513 984 aaKnown RBP15.33■□□□□ 0.04
SMG6-215ENST00000574501 PDK4Q16654 411 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 BMT2Q1RMZ1 405 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 TRIM74Q86UV6 250 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 TRIM73Q86UV7 250 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 SCYL3Q8IZE3 742 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 PTPRN2Q92932 1015 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 HERPUD2Q9BSE4 406 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 ARL8BQ9NVJ2 186 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 LNPEPQ9UIQ6 1025 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 WASF2Q9Y6W5 498 aa15.33■□□□□ 0.04
SMG6-215ENST00000574501 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 EXOC1LA0A1B0GW35 172 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 GSC2O15499 205 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 CA4P22748 312 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 NT5C2P49902 561 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 STAT4Q14765 748 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 CNPY1Q3B7I2 92 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 PPFIBP2Q8ND30 876 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 ATL2Q8NHH9 583 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 BTBD10Q9BSF8 475 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 DMAP1Q9NPF5 467 aaPredicted RBP15.32■□□□□ 0.04
SMG6-215ENST00000574501 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.32■□□□□ 0.04
SMG6-215ENST00000574501 GYG2O15488 501 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 MAP3K7O43318 606 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 SGPL1O95470 568 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 ETS2P15036 469 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 GCAP28676 217 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 AP1B1Q10567 949 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 PTK6Q13882 451 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 WDR72Q3MJ13 1102 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 PRR16Q569H4 304 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 SLC45A4Q5BKX6 768 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
SMG6-215ENST00000574501 HS2ST1Q7LGA3 356 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 CCDC24Q8N4L8 307 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 MYCT1Q8N699 235 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 RFWD2Q8NHY2 731 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 PRR11Q96HE9 360 aaPredicted RBP15.32■□□□□ 0.04
SMG6-215ENST00000574501 KIAA1586Q9HCI6 787 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 KRT82Q9NSB4 513 aa15.32■□□□□ 0.04
SMG6-215ENST00000574501 RPL26L1Q9UNX3 145 aaKnown RBP15.32■□□□□ 0.04
SMG6-215ENST00000574501 R3HDM2Q9Y2K5 976 aaKnown RBP15.32■□□□□ 0.04
SMG6-215ENST00000574501 CCDC22O60826 627 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 MUTP22033 750 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 ZNF804AQ7Z570 1209 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 ZNF75CPQ92670 426 aaPredicted RBP15.31■□□□□ 0.04
SMG6-215ENST00000574501 SLC5A5Q92911 643 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 KAT5Q92993 513 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 STMN2Q93045 179 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 MCUR1Q96AQ8 359 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 ZNF184Q99676 751 aaPredicted RBP15.31■□□□□ 0.04
SMG6-215ENST00000574501 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMG6-215ENST00000574501 AHDC1Q5TGY3 1603 aaPredicted RBP15.31■□□□□ 0.04
SMG6-215ENST00000574501 PHLPP1O60346 1717 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 A0A0G2JND7 137 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 USP17L10C9JJH3 530 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 FSCN2O14926 492 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 SPIRE1Q08AE8 756 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 SF3B3Q15393 1217 aaKnown RBP15.31■□□□□ 0.04
SMG6-215ENST00000574501 HHATQ5VTY9 493 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 RINLQ6ZS11 566 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 VPS52Q8N1B4 723 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 PSPC1Q8WXF1 523 aaKnown RBP15.31■□□□□ 0.04
SMG6-215ENST00000574501 SLCO2A1Q92959 643 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 SMC6Q96SB8 1091 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 HEMGNQ9BXL5 484 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 CYLDQ9NQC7 956 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 PDP2Q9P2J9 529 aa15.31■□□□□ 0.04
SMG6-215ENST00000574501 A0A1W2PPM1 405 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 C2CD2LO14523 706 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 CREB3O43889 395 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 GAS8O95995 478 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 LYNP07948 512 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 BCRP11274 1271 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 MAGEA4P43358 317 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 SCNN1BP51168 640 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
SMG6-215ENST00000574501 DLG4P78352 724 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 THOC5Q13769 683 aaKnown RBP15.3■□□□□ 0.04
SMG6-215ENST00000574501 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
SMG6-215ENST00000574501 MAPK6Q16659 721 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 LVRNQ6Q4G3 990 aa15.3■□□□□ 0.04
SMG6-215ENST00000574501 KLHL23Q8NBE8 558 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms