RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PTGESO14684 152 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 LRP3O75074 770 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 RECQL4O94761 1208 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 DEXIO95424 95 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 POU2F2P09086 479 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 TDGF1P13385 188 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 PTPN2P17706 415 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 GDI1P31150 447 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 ELF1P32519 619 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 ARPP19P56211 112 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 SATB1Q01826 763 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 POU5F1BQ06416 359 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 CSRP2Q16527 193 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 FAM78AQ5JUQ0 283 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 PPP4R3AQ6IN85 833 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 CEP68Q76N32 757 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 NEK8Q86SG6 692 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 FAM3CQ92520 227 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 HAS1Q92839 578 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 ZFP14Q9HCL3 533 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 MTRRQ9UBK8 725 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 GDAQ9Y2T3 454 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 SNX14Q9Y5W7 946 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 PIAS3Q9Y6X2 628 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 CFAP47Q6ZTR5 3102 aa13.48□□□□□ -0.25
PRPF8-208ENST00000573716 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
PRPF8-208ENST00000573716 PDCD11Q14690 1871 aaKnown RBP13.47□□□□□ -0.25
PRPF8-208ENST00000573716 A0A087WWV3 80 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 USO1O60763 962 aaKnown RBP13.47□□□□□ -0.25
PRPF8-208ENST00000573716 DGAT1O75907 488 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 B3GAT3O94766 335 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 BAG4O95429 457 aaKnown RBP13.47□□□□□ -0.25
PRPF8-208ENST00000573716 GCFC2P16383 781 aaKnown RBP13.47□□□□□ -0.25
PRPF8-208ENST00000573716 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
PRPF8-208ENST00000573716 ARL2P36404 184 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 CXCL12P48061 93 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 NPY5RQ15761 445 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 AASDHQ4L235 1098 aaPredicted RBP13.47□□□□□ -0.25
PRPF8-208ENST00000573716 POTEHQ6S545 545 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 SKAP1Q86WV1 359 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 NOSTRINQ8IVI9 506 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 IRF7Q92985 503 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 TCEAL4Q96EI5 215 aa13.47□□□□□ -0.25
PRPF8-208ENST00000573716 BAHCC1Q9P281 2608 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 N4BP3O15049 544 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 TBX3O15119 743 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 HRO43593 1189 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 SLITRK3O94933 977 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 FGFR3P22607 806 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 FCARP24071 287 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 IGFBP6P24592 240 aaPredicted RBP13.46□□□□□ -0.25
PRPF8-208ENST00000573716 CCNE1P24864 410 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 STK3Q13188 491 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 GLRA4Q5JXX5 417 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 GALNT17Q6IS24 598 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 ZBTB8OSQ8IWT0 167 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 EIF2AK1Q9BQI3 630 aaKnown RBP13.46□□□□□ -0.25
PRPF8-208ENST00000573716 LARP6Q9BRS8 491 aaKnown RBP13.46□□□□□ -0.25
PRPF8-208ENST00000573716 IER2Q9BTL4 223 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 PDZD7Q9H5P4 517 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
PRPF8-208ENST00000573716 GPRC5CQ9NQ84 441 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 PRMT7Q9NVM4 692 aaPredicted RBP13.46□□□□□ -0.25
PRPF8-208ENST00000573716 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 ZFHX4Q86UP3 3567 aa13.46□□□□□ -0.25
PRPF8-208ENST00000573716 TRIP11Q15643 1979 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 COL4A2P08572 1712 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 NRG2O14511 850 aaPredicted RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 CDC45O75419 566 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 VIPR2P41587 438 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 BRCC3P46736 316 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 PRPF4BQ13523 1007 aaKnown RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 CCDC6Q16204 474 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 VITQ6UXI7 678 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 ANKS3Q6ZW76 656 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 PDZD4Q76G19 769 aaPredicted RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 DDX1Q92499 740 aaKnown RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 ADPGKQ9BRR6 497 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 NFKBIZQ9BYH8 718 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 CYP4F11Q9HBI6 524 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
PRPF8-208ENST00000573716 ANKEF1Q9NU02 776 aa13.45□□□□□ -0.26
PRPF8-208ENST00000573716 SDK1Q7Z5N4 2213 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 ZNF197O14709 1029 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 ZNF263O14978 683 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 PRKCBP05771 671 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 MYL4P12829 197 aa13.44□□□□□ -0.26
PRPF8-208ENST00000573716 PSMC3P17980 439 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms