RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FBXW5Q969U6 566 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF653Q96CK0 615 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 CFAP36Q96G28 342 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 CNDP1Q96KN2 507 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 COG8Q96MW5 612 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 AGAP3Q96P47 875 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 USP26Q9BXU7 913 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 MKRN2Q9H000 416 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 C1orf21Q9H246 121 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 MS4A5Q9H3V2 200 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 COPS7BQ9H9Q2 264 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 SEPSECSQ9HD40 501 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 SERHLQ9NQF3 203 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF215Q9UL58 517 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 PCDHGC5Q9Y5F6 944 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 BACE2Q9Y5Z0 518 aa5.48□□□□□ -1.53
TOPBP1-210ENST00000572787 KRT87PA6NCN2 255 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CCDC154A6NI56 674 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 AQP12BA6NM10 295 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CACNB4O00305 520 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SPTLC2O15270 562 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC16A6O15403 523 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF862O60290 1169 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 E2F6O75461 281 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 KRT37O76014 449 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 S1PR4O95977 384 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 FTLP02792 175 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 A1BGP04217 495 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 HEXBP07686 556 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 PDHA1P08559 390 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ITGA5P08648 1049 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CSF1P09603 554 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 HNRNPA1P09651 372 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CYP2A6P11509 494 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 LAMP2P13473 410 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 BRAFP15056 766 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 FERP16591 822 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 TBXAS1P24557 533 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 PSMA4P25789 261 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 PBLDP30039 288 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 HOXA11P31270 313 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ACSL1P33121 698 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 TCF7P36402 384 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 THPOP40225 353 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ASMTP46597 345 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ZNF41P51814 821 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 RAD23AP54725 363 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 BCAR1P56945 870 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC26A5P58743 744 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ACTR2P61160 394 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 MAP3K12Q12852 859 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 AIMP1Q12904 312 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 FOXC1Q12948 553 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 DUSP28Q4G0W2 176 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CEP55Q53EZ4 464 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 TCP11X2Q5H9J9 407 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 C10orf76Q5T2E6 689 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 TIGD7Q6NT04 549 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 FBXO38Q6PIJ6 1188 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 KLHL24Q6TFL4 600 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CPLX4Q7Z7G2 160 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 PPIL6Q8IXY8 311 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SRBD1Q8N5C6 995 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CISD2Q8N5K1 135 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ZBTB44Q8NCP5 570 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 IL17RDQ8NFM7 739 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 DEPDC1BQ8WUY9 529 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 AFG1LQ8WV93 481 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SHC3Q92529 594 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 KRT35Q92764 455 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CUL5Q93034 780 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SDCCAG3Q96C92 435 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 MTFMTQ96DP5 389 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 RAX2Q96IS3 184 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 PPP1R13BQ96KQ4 1090 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CCDC114Q96M63 670 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ATP6V0BQ99437 205 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ELF4Q99607 663 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 TCHPQ9BT92 498 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CD244Q9BZW8 370 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ZCCHC2Q9C0B9 1178 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ZCWPW1Q9H0M4 648 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 RASSF4Q9H2L5 321 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 TMEM8AQ9HCN3 771 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 KRT82Q9NSB4 513 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SEPT11Q9NVA2 429 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CGNQ9P2M7 1197 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 HECAQ9UBI9 543 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 TRAF3IP3Q9Y228 551 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 ITM2BQ9Y287 266 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 CYP46A1Q9Y6A2 500 aa5.47□□□□□ -1.53
TOPBP1-210ENST00000572787 SLC12A8A0AV02 714 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 AGAP14A8MT82 685 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 UBXN8O00124 270 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 MYO1FO00160 1098 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 AP3B1O00203 1094 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 TAF4O00268 1085 aa5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 SH2B2O14492 632 aaPredicted RBP5.46□□□□□ -1.54
TOPBP1-210ENST00000572787 KIAA0355O15063 1070 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms