RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 SEC24BO95487 1268 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 CAVIN2O95810 425 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 ELF1P32519 619 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 PXNP49023 591 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-208ENST00000572270 CREB5Q02930 508 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 SPIRE1Q08AE8 756 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.52□□□□□ -0.09
CCDC40-208ENST00000572270 MFSD6LQ8IWD5 586 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 SYNPOQ8N3V7 929 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 GSTCDQ8NEC7 633 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 TMEM143Q96AN5 459 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 TCEAL4Q96EI5 215 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 C6orf50Q9HD87 102 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 KLK14Q9P0G3 267 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 GPSM3Q9Y4H4 160 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 CDY1Q9Y6F8 540 aa14.52□□□□□ -0.09
CCDC40-208ENST00000572270 FREM2Q5SZK8 3169 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 LNP1A1A4G5 178 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 SPECC1L-ADORA2AF8WAN1 911 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 PRRG1O14668 218 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 ASAP2O43150 1006 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 RHOBTB1O94844 696 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 HOXC13P31276 330 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 SOX9P48436 509 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 PLK5Q496M5 336 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 CYP4A22Q5TCH4 519 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 ANO5Q75V66 913 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 RALGPS2Q86X27 583 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-208ENST00000572270 PROSER1Q86XN7 944 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 ELMOD1Q8N336 334 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 CCDC12Q8WUD4 166 aaPredicted RBP14.51□□□□□ -0.09
CCDC40-208ENST00000572270 TCP11Q8WWU5 503 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 SLC5A5Q92911 643 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 E2F7Q96AV8 911 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 CCDC136Q96JN2 1154 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 MTRRQ9UBK8 725 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 KLK13Q9UKR3 277 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 SLC8A2Q9UPR5 921 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 LAMA5O15230 3695 aa14.51□□□□□ -0.09
CCDC40-208ENST00000572270 ARHGEF37A1IGU5 675 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 HEPACAM2A8MVW5 462 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 INO80B-WBP1J3KQ70 363 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 ARNTLO00327 626 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 NRG2O14511 850 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-208ENST00000572270 CHADO15335 359 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 EXTL3O43909 919 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 CTHP32929 405 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 VIPR2P41587 438 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 PSMC5P62195 406 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 FGD1P98174 961 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 KARSQ15046 597 aaKnown RBP14.5□□□□□ -0.09
CCDC40-208ENST00000572270 PON2Q15165 354 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 RTN1Q16799 776 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 DEFB124Q8NES8 71 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 ZSCAN18Q8TBC5 510 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-208ENST00000572270 CEP170P1Q96L14 293 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 MKNK1Q9BUB5 465 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 LRRC2Q9BYS8 371 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 SLC32A1Q9H598 525 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 SLITRK6Q9H5Y7 841 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 BMP2KQ9NSY1 1161 aaPredicted RBP14.5□□□□□ -0.09
CCDC40-208ENST00000572270 PPME1Q9Y570 386 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 EML5Q05BV3 1969 aa14.5□□□□□ -0.09
CCDC40-208ENST00000572270 ESYT2A0FGR8 921 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 MYBPHLA2RUH7 354 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 KHNYNO15037 678 aaKnown RBP14.49□□□□□ -0.09
CCDC40-208ENST00000572270 PSMD10O75832 226 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 NPTXRO95502 500 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 GNA11P29992 359 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 RDXP35241 583 aaKnown RBP14.49□□□□□ -0.09
CCDC40-208ENST00000572270 RFC5P40937 340 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 CCINQ13939 588 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 COL28A1Q2UY09 1125 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 UAP1L1Q3KQV9 507 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 WDR44Q5JSH3 913 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 IQCEQ6IPM2 695 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 TXNDC11Q6PKC3 985 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 FERMT3Q86UX7 667 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 SGMS1Q86VZ5 419 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 GJA10Q969M2 543 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 ZSWIM3Q96MP5 696 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 ZMYND12Q9H0C1 365 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 DHX33Q9H6R0 707 aaKnown RBP14.49□□□□□ -0.09
CCDC40-208ENST00000572270 TRPV4Q9HBA0 871 aa14.49□□□□□ -0.09
CCDC40-208ENST00000572270 BCLAF3A2AJT9 711 aaKnown RBP14.48□□□□□ -0.09
CCDC40-208ENST00000572270 DKC1O60832 514 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC40-208ENST00000572270 ATG13O75143 517 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 THP07101 528 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 CCR2P41597 374 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 NPEPPSP55786 919 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 FUT2Q10981 343 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 TFDP1Q14186 410 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 SLC27A1Q6PCB7 646 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 APOA5Q6Q788 366 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 ANKS3Q6ZW76 656 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 DUSP15Q9H1R2 295 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-208ENST00000572270 RBM8AQ9Y5S9 174 aaKnown RBP14.48□□□□□ -0.09
CCDC40-208ENST00000572270 BACE2Q9Y5Z0 518 aa14.48□□□□□ -0.09
CCDC40-208ENST00000572270 ARF4P18085 180 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms