RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 CITO14578 2027 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 LAMTOR5O43504 91 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 XYLBO75191 536 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 PRKCBP05771 671 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 CEBPBP17676 345 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 PRKCQQ04759 706 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 SOX4Q06945 474 aaPredicted RBP21.16■□□□□ 0.98
NUP88-203ENST00000572019 ME3Q16798 604 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 PPP1R10Q96QC0 940 aaKnown RBP21.16■□□□□ 0.98
NUP88-203ENST00000572019 HEBP1Q9NRV9 189 aa21.16■□□□□ 0.98
NUP88-203ENST00000572019 PDCD11Q14690 1871 aaKnown RBP21.15■□□□□ 0.98
NUP88-203ENST00000572019 B3GAT3O94766 335 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 RHOP08100 348 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 XRCC6P12956 609 aaKnown RBP eCLIP21.15■□□□□ 0.98
NUP88-203ENST00000572019 ZNF528Q3MIS6 628 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 VARS2Q5ST30 1063 aaKnown RBP21.15■□□□□ 0.98
NUP88-203ENST00000572019 NT5DC1Q5TFE4 455 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 TANGO2Q6ICL3 276 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 ZBTB8OSQ8IWT0 167 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 DIS3L2Q8IYB7 885 aaKnown RBP21.15■□□□□ 0.98
NUP88-203ENST00000572019 CEP120Q8N960 986 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 NSUN7Q8NE18 718 aaKnown RBP21.15■□□□□ 0.98
NUP88-203ENST00000572019 CLDN23Q96B33 292 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 FBXO4Q9UKT5 387 aa21.15■□□□□ 0.98
NUP88-203ENST00000572019 ACKR2O00590 384 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 POU2F2P09086 479 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 FCARP24071 287 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 ST3GAL1Q11201 340 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 ECM1Q16610 540 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 MAPK6Q16659 721 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 TMEM132AQ24JP5 1023 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 PADI6Q6TGC4 694 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 ZBTB44Q8NCP5 570 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 MCPH1Q8NEM0 835 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 NELL1Q92832 810 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 TCEAL4Q96EI5 215 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 OSBPL6Q9BZF3 934 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 KCNH3Q9ULD8 1083 aa21.14■□□□□ 0.97
NUP88-203ENST00000572019 MRPS23Q9Y3D9 190 aaKnown RBP21.14■□□□□ 0.97
NUP88-203ENST00000572019 TMEM189-UBE2V1I3L0A0 370 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 LILRB5O75023 590 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 TGM1P22735 817 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 MCM7P33993 719 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 ELAVL2Q12926 359 aaKnown RBP21.13■□□□□ 0.97
NUP88-203ENST00000572019 GRM2Q14416 872 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 UPP1Q16831 310 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 UVSSAQ2YD98 709 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 ZBTB41Q5SVQ8 909 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 ZNF687Q8N1G0 1237 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 TMEM130Q8N3G9 435 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 TUFT1Q9NNX1 390 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 NCDNQ9UBB6 729 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 EPG5Q9HCE0 2579 aa21.13■□□□□ 0.97
NUP88-203ENST00000572019 NCANO14594 1321 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 WDR27A2RRH5 827 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 CYP11B2P19099 503 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 CCR2P41597 374 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 ROR1Q01973 937 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 PRSS36Q5K4E3 855 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 WASF1Q92558 559 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 GTF3C6Q969F1 213 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 CNTNAP3BQ96NU0 1288 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 CNTNAP3Q9BZ76 1288 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 C2orf40Q9H1Z8 148 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 SMG5Q9UPR3 1016 aaKnown RBP21.12■□□□□ 0.97
NUP88-203ENST00000572019 PCDHGA2Q9Y5H1 932 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 BACE2Q9Y5Z0 518 aa21.12■□□□□ 0.97
NUP88-203ENST00000572019 SPTLC1O15269 473 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 MEFVO15553 781 aaPredicted RBP21.11■□□□□ 0.97
NUP88-203ENST00000572019 ECI2O75521 394 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 SEC24AO95486 1093 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 NAMPTP43490 491 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 PFKPQ01813 784 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 GUCY1B3Q02153 619 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 MTAPQ13126 283 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 DEPTORQ8TB45 409 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 ZMAT2Q96NC0 199 aaKnown RBP21.11■□□□□ 0.97
NUP88-203ENST00000572019 ADPGKQ9BRR6 497 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 POLR3CQ9BUI4 534 aaPredicted RBP21.11■□□□□ 0.97
NUP88-203ENST00000572019 BRMS1Q9HCU9 246 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 PARD6AQ9NPB6 346 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 PRMT8Q9NR22 394 aaPredicted RBP21.11■□□□□ 0.97
NUP88-203ENST00000572019 ZSCAN32Q9NX65 697 aa21.11■□□□□ 0.97
NUP88-203ENST00000572019 TDGF1P13385 188 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 RBM25P49756 843 aaKnown RBP21.1■□□□□ 0.97
NUP88-203ENST00000572019 ATXN1P54253 815 aaKnown RBP21.1■□□□□ 0.97
NUP88-203ENST00000572019 FAM78AQ5JUQ0 283 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 ATF7IP2Q5U623 682 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 PDXDC1Q6P996 788 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 ATRIPQ8WXE1 791 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 ZSWIM3Q96MP5 696 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 NACC1Q96RE7 527 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 EPC1Q9H2F5 836 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 RALGAPA1Q6GYQ0 2036 aa21.1■□□□□ 0.97
NUP88-203ENST00000572019 KMT2BQ9UMN6 2715 aaPredicted RBP21.1■□□□□ 0.97
NUP88-203ENST00000572019 ACACBO00763 2458 aa21.09■□□□□ 0.97
NUP88-203ENST00000572019 SMIM28A0A1B0GU29 152 aa21.09■□□□□ 0.97
NUP88-203ENST00000572019 ARHGEF37A1IGU5 675 aa21.09■□□□□ 0.97
NUP88-203ENST00000572019 ARHGEF35A5YM69 484 aa21.09■□□□□ 0.97
NUP88-203ENST00000572019 TBC1D4O60343 1298 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms