RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PON1P27169 355 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 ATICP31939 592 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
CDRT1-206ENST00000571263 TBX2Q13207 712 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-206ENST00000571263 BIRC3Q13489 604 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 TRPC3Q13507 836 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 MBTPS1Q14703 1052 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 SGSM1Q2NKQ1 1148 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 CBWD6Q4V339 395 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 CBWD3Q5JTY5 395 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 CBWD5Q5RIA9 395 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 CNKSR3Q6P9H4 555 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 CACNA2D4Q7Z3S7 1137 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 SMG8Q8ND04 991 aaKnown RBP12.88□□□□□ -0.35
CDRT1-206ENST00000571263 DBF4BQ8NFT6 615 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 SNX27Q96L92 541 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
CDRT1-206ENST00000571263 NXF3Q9H4D5 531 aaKnown RBP12.88□□□□□ -0.35
CDRT1-206ENST00000571263 FAM124BQ9H5Z6 455 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-206ENST00000571263 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 CEP72Q9P209 647 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 KANSL3Q9P2N6 904 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 ITGA11Q9UKX5 1188 aa12.88□□□□□ -0.35
CDRT1-206ENST00000571263 C9IYK1 514 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
CDRT1-206ENST00000571263 RECQL4O94761 1208 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 CCDC172P0C7W6 258 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 ACTN1P12814 892 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 CYP2C18P33260 490 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 RBP5P82980 135 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 ZBED6P86452 979 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 IKBKEQ14164 716 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 ZBTB6Q15916 424 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 KLHDC7AQ5VTJ3 777 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 MFSD5Q6N075 450 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 TRIM65Q6PJ69 517 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 TMEM192Q8IY95 271 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 ZNF516Q92618 1163 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 TRIM44Q96DX7 344 aaPredicted RBP12.87□□□□□ -0.35
CDRT1-206ENST00000571263 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 NT5C1BQ96P26 610 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 RPS6KC1Q96S38 1066 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 LSM14BQ9BX40 385 aaKnown RBP12.87□□□□□ -0.35
CDRT1-206ENST00000571263 PPP1R12CQ9BZL4 782 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 RSAD1Q9HA92 442 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 ZNHIT6Q9NWK9 470 aaKnown RBP12.87□□□□□ -0.35
CDRT1-206ENST00000571263 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 APEX2Q9UBZ4 518 aa12.87□□□□□ -0.35
CDRT1-206ENST00000571263 SMIM28A0A1B0GU29 152 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 ABHD14A-ACY1A0A1B0GW23 586 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 ENPP3O14638 875 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 INPPL1O15357 1258 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
CDRT1-206ENST00000571263 THP07101 528 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 P4HA1P13674 534 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 ATF7P17544 494 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-206ENST00000571263 SLC9A1P19634 815 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
CDRT1-206ENST00000571263 PIK3CAP42336 1068 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 MFAP3P55082 362 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 CCL23P55773 120 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 NCOA4Q13772 614 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 TTC39CQ8N584 583 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 CCDC112Q8NEF3 446 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 OR8K1Q8NGG5 319 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 LMO3Q8TAP4 145 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 SYN2Q92777 582 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-206ENST00000571263 CRACR2AQ9BSW2 395 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 APOL6Q9BWW8 343 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 STK33Q9BYT3 514 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 INTS2Q9H0H0 1204 aaKnown RBP12.86□□□□□ -0.35
CDRT1-206ENST00000571263 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 FAM207AQ9NSI2 230 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-206ENST00000571263 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 LRFN2Q9ULH4 789 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 PCDHB7Q9Y5E2 793 aa12.86□□□□□ -0.35
CDRT1-206ENST00000571263 MGEA5O60502 916 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 BAIAP3O94812 1187 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 UCHL3P15374 230 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 AKAP5P24588 427 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 CASP14P31944 242 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 RPL9P32969 192 aaKnown RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 PNPLA4P41247 253 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 GCNT1Q02742 428 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 MYO1EQ12965 1108 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 PPIGQ13427 754 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 GPNMBQ14956 572 aa12.85□□□□□ -0.35
CDRT1-206ENST00000571263 TDRD10Q5VZ19 366 aaKnown RBP12.85□□□□□ -0.35
CDRT1-206ENST00000571263 GLB1LQ6UWU2 654 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms