RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 LEO1Q8WVC0 666 aaPredicted RBP13.84□□□□□ -0.19
TVP23B-204ENST00000571018 STAMQ92783 540 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 UROC1Q96N76 676 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 ZMAT2Q96NC0 199 aaKnown RBP13.84□□□□□ -0.19
TVP23B-204ENST00000571018 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
TVP23B-204ENST00000571018 KLHL5Q96PQ7 755 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 MRPL44Q9H9J2 332 aaKnown RBP13.84□□□□□ -0.19
TVP23B-204ENST00000571018 PANK4Q9NVE7 773 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 CNTN3Q9P232 1028 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 UNC80Q8N2C7 3258 aa13.84□□□□□ -0.19
TVP23B-204ENST00000571018 CUL9Q8IWT3 2517 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 A0A0B4J269 797 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 TMEM189-UBE2V1I3L0A0 370 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 OGTO15294 1046 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 POLR2DO15514 142 aaKnown RBP13.83□□□□□ -0.2
TVP23B-204ENST00000571018 FAM189A1O60320 539 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 KIF4AO95239 1232 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 CLTAP09496 248 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 CNPP09543 421 aaKnown RBP13.83□□□□□ -0.2
TVP23B-204ENST00000571018 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.2
TVP23B-204ENST00000571018 DSG1Q02413 1049 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 SMAD2Q15796 467 aaKnown RBP13.83□□□□□ -0.2
TVP23B-204ENST00000571018 USP41Q3LFD5 358 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 ADALQ6DHV7 355 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 ANKRD54Q6NXT1 300 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 LLGL2Q6P1M3 1020 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 CNNM4Q6P4Q7 775 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 SLC39A4Q6P5W5 647 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 DCLRE1AQ6PJP8 1040 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 PPFIBP1Q86W92 1011 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 CCDC65Q8IXS2 484 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 TMEM87AQ8NBN3 555 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 SLC22A17Q8WUG5 538 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 CASP10Q92851 521 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 CHAMP1Q96JM3 812 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 SPATA32Q96LK8 384 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 PYM1Q9BRP8 204 aaKnown RBP13.83□□□□□ -0.2
TVP23B-204ENST00000571018 EMILIN2Q9BXX0 1053 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 TRIM9Q9C026 710 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 PLEKHA5Q9HAU0 1116 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 MAGEF1Q9HAY2 307 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 SLC38A7Q9NVC3 462 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 STYXL1Q9Y6J8 313 aa13.83□□□□□ -0.2
TVP23B-204ENST00000571018 SF3B1O75533 1304 aaKnown RBP eCLIP13.83□□□□□ -0.2
TVP23B-204ENST00000571018 TTC26A0AVF1 554 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 ANKRD63C9JTQ0 380 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 C2CD2LO14523 706 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 CLCNKBP51801 687 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 SOX4Q06945 474 aaPredicted RBP13.82□□□□□ -0.2
TVP23B-204ENST00000571018 ALCAMQ13740 583 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 UPP1Q16831 310 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 SLFN12LQ6IEE8 588 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 SYCE2Q6PIF2 218 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 PDCD7Q8N8D1 485 aaKnown RBP13.82□□□□□ -0.2
TVP23B-204ENST00000571018 HASPINQ8TF76 798 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 DDX27Q96GQ7 796 aaKnown RBP13.82□□□□□ -0.2
TVP23B-204ENST00000571018 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
TVP23B-204ENST00000571018 S1PR5Q9H228 398 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 TBC1D7Q9P0N9 293 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 KCNH3Q9ULD8 1083 aa13.82□□□□□ -0.2
TVP23B-204ENST00000571018 TCF20Q9UGU0 1960 aaKnown RBP13.82□□□□□ -0.2
TVP23B-204ENST00000571018 B3GAT3O94766 335 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 GCNT3O95395 438 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 ADRB2P07550 413 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 CXCL8P10145 99 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 CMA1P23946 247 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 KLRC2P26717 231 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 TNFSF9P41273 254 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 CASP5P51878 434 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 NUCB2P80303 420 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 KCNA1Q09470 495 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 ELAVL2Q12926 359 aaKnown RBP13.81□□□□□ -0.2
TVP23B-204ENST00000571018 L1TD1Q5T7N2 865 aaKnown RBP13.81□□□□□ -0.2
TVP23B-204ENST00000571018 FAM171A1Q5VUB5 890 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 CD300LGQ6UXG3 332 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 ACCSQ96QU6 501 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 MSTO1Q9BUK6 570 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 GOLGA2P5Q9HBQ8 144 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.81□□□□□ -0.2
TVP23B-204ENST00000571018 CPSF3Q9UKF6 684 aaKnown RBP13.81□□□□□ -0.2
TVP23B-204ENST00000571018 EXOC7Q9UPT5 735 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 USP15Q9Y4E8 981 aaPredicted RBP13.81□□□□□ -0.2
TVP23B-204ENST00000571018 BRWD1Q9NSI6 2320 aa13.81□□□□□ -0.2
TVP23B-204ENST00000571018 TISP43B9A030 160 aa13.8□□□□□ -0.2
TVP23B-204ENST00000571018 TEX28O15482 410 aa13.8□□□□□ -0.2
TVP23B-204ENST00000571018 ADH1AP07327 375 aa13.8□□□□□ -0.2
TVP23B-204ENST00000571018 MYBP10242 640 aa13.8□□□□□ -0.2
TVP23B-204ENST00000571018 EPCAMP16422 314 aa13.8□□□□□ -0.2
TVP23B-204ENST00000571018 IGFBP6P24592 240 aaPredicted RBP13.8□□□□□ -0.2
TVP23B-204ENST00000571018 RPL9P32969 192 aaKnown RBP13.8□□□□□ -0.2
TVP23B-204ENST00000571018 CLCN4P51793 760 aa13.8□□□□□ -0.2
TVP23B-204ENST00000571018 POSTNQ15063 836 aa13.8□□□□□ -0.2
TVP23B-204ENST00000571018 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms