RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SYT2Q8N9I0 419 aaPredicted RBP13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 KREMEN2Q8NCW0 462 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 CMASQ8NFW8 434 aaPredicted RBP13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 SPIRE2Q8WWL2 714 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 ACSF2Q96CM8 615 aaPredicted RBP13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 CALML4Q96GE6 196 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 TARS2Q9BW92 718 aaKnown RBP13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 FNIP2Q9P278 1114 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 MUC6Q6W4X9 2439 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 MYBP10242 640 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 MCF2P10911 925 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 OSTNP61366 133 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 NAB2Q15742 525 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 FAM171A1Q5VUB5 890 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 PRSS55Q6UWB4 352 aaPredicted RBP13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 OTOP3Q7RTS5 596 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 TAS1R3Q7RTX0 852 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 PALB2Q86YC2 1186 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 GLYCTKQ8IVS8 523 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 SUGP1Q8IWZ8 645 aaKnown RBP13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 ZDHHC14Q8IZN3 488 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 CEP120Q8N960 986 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 HDAC7Q8WUI4 952 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 PBXIP1Q96AQ6 731 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 UROC1Q96N76 676 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 PPP1R10Q96QC0 940 aaKnown RBP13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 CXCL16Q9H2A7 254 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 PTPRHQ9HD43 1115 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 SORCS3Q9UPU3 1222 aa13.55□□□□□ -0.24
CTDNEP1-205ENST00000570828 CCDC195A0A1B0GUA6 201 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 H0YCG3 227 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 TGM5O43548 720 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 B3GAT3O94766 335 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 C1RP00736 705 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 SPATA31D3P0C874 917 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 HARSP12081 509 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 RPL17P18621 184 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 LONP1P36776 959 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 PSMD5Q16401 504 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 PDXDC1Q6P996 788 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 CYP26C1Q6V0L0 522 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 SPATA31D4Q6ZUB0 917 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 BMP8AQ7Z5Y6 402 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 GPBP1Q86WP2 473 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 UBALD2Q8IYN6 164 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 TMEM161BQ8NDZ6 487 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 FEZF2Q8TBJ5 459 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 STAMQ92783 540 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 NTPCRQ9BSD7 190 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 ZDHHC7Q9NXF8 308 aa13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 LARSQ9P2J5 1176 aaKnown RBP13.54□□□□□ -0.24
CTDNEP1-205ENST00000570828 NPHP3-ACAD11A0A0J9YXS1 232 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 SMIM28A0A1B0GU29 152 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 TMEM189-UBE2V1I3L0A0 370 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 TOM1L1O75674 476 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 RFPL2O75678 378 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 BRD1O95696 1058 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 ASGR2P07307 311 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 MAPTP10636 758 aaKnown RBP13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 PROZP22891 400 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 CLCNKBP51801 687 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 LIN9Q5TKA1 542 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 DCLRE1AQ6PJP8 1040 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 SMG7Q92540 1137 aaKnown RBP13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 ASIC4Q96FT7 647 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 BICD1Q96G01 975 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 SNX27Q96L92 541 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 ACAP3Q96P50 834 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 RHOBTB2Q9BYZ6 727 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 PIDD1Q9HB75 910 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 LIMD1Q9UGP4 676 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 ODF2LQ9ULJ1 636 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 TECTAO75443 2155 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 CLUHO75153 1309 aa13.53□□□□□ -0.24
CTDNEP1-205ENST00000570828 TRAPPC3O43617 180 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 FAM13AO94988 1023 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 PLCG1P19174 1290 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 DHX8Q14562 1220 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 KARSQ15046 597 aaKnown RBP13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 UPP1Q16831 310 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 FBXL6Q8N531 539 aa13.52□□□□□ -0.25
CTDNEP1-205ENST00000570828 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms