RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 DLGAP2Q9P1A6 1054 aa23.16■■□□□ 1.3
PKD1-240ENST00000570253 BACE2Q9Y5Z0 518 aa23.16■■□□□ 1.3
PKD1-240ENST00000570253 TTLL13PA6NNM8 815 aa23.15■■□□□ 1.3
PKD1-240ENST00000570253 CLCNKBP51801 687 aa23.15■■□□□ 1.3
PKD1-240ENST00000570253 NAB2Q15742 525 aa23.15■■□□□ 1.3
PKD1-240ENST00000570253 EEF1DP3Q658K8 133 aa23.15■■□□□ 1.3
PKD1-240ENST00000570253 RUBCNQ92622 972 aa23.15■■□□□ 1.3
PKD1-240ENST00000570253 DDX27Q96GQ7 796 aaKnown RBP23.15■■□□□ 1.3
PKD1-240ENST00000570253 RPP25Q9BUL9 199 aaKnown RBP23.15■■□□□ 1.3
PKD1-240ENST00000570253 OSBPL6Q9BZF3 934 aa23.15■■□□□ 1.3
PKD1-240ENST00000570253 FOXP1Q9H334 677 aaPredicted RBP23.15■■□□□ 1.3
PKD1-240ENST00000570253 VWA8A3KMH1 1905 aa23.14■■□□□ 1.3
PKD1-240ENST00000570253 TTC38Q5R3I4 469 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 KIAA2013Q8IYS2 634 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 ITFG1Q8TB96 612 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 PPP1R10Q96QC0 940 aaKnown RBP23.14■■□□□ 1.29
PKD1-240ENST00000570253 KXD1Q9BQD3 176 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 KIFC3Q9BVG8 833 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 BHMT2Q9H2M3 363 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 GDE1Q9NZC3 331 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 LRWD1Q9UFC0 647 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 TNFSF13BQ9Y275 285 aa23.14■■□□□ 1.29
PKD1-240ENST00000570253 DOCK6Q96HP0 2047 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 CCDC169A6NNP5 214 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 PRRG1O14668 218 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 ADAM12O43184 909 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 TRAPPC10P48553 1259 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 UPP1Q16831 310 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 ZNF528Q3MIS6 628 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 NPAS3Q8IXF0 933 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 FAM184AQ8NB25 1140 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 NELL2Q99435 816 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 DNMT3BQ9UBC3 853 aaKnown RBP23.13■■□□□ 1.29
PKD1-240ENST00000570253 FBXO4Q9UKT5 387 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 USP20Q9Y2K6 914 aa23.13■■□□□ 1.29
PKD1-240ENST00000570253 MRPS17Q9Y2R5 130 aaKnown RBP23.13■■□□□ 1.29
PKD1-240ENST00000570253 EP300Q09472 2414 aaPredicted RBP23.12■■□□□ 1.29
PKD1-240ENST00000570253 FAM170BA6NMN3 283 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 H7C4K7 107 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 PTPN2P17706 415 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 TKTP29401 623 aaKnown RBP23.12■■□□□ 1.29
PKD1-240ENST00000570253 GRM5P41594 1212 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 DMP1Q13316 513 aaPredicted RBP23.12■■□□□ 1.29
PKD1-240ENST00000570253 ZNF568Q3ZCX4 644 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 ZBTB41Q5SVQ8 909 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 ELMOD1Q8N336 334 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 ING5Q8WYH8 240 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 SECISBP2LQ93073 1101 aaKnown RBP23.12■■□□□ 1.29
PKD1-240ENST00000570253 MRPL4Q9BYD3 311 aaKnown RBP23.12■■□□□ 1.29
PKD1-240ENST00000570253 HCFC1R1Q9NWW0 138 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 KIAA1024Q9UPX6 916 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 NUB1Q9Y5A7 615 aa23.12■■□□□ 1.29
PKD1-240ENST00000570253 SPTLC1O15269 473 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 ECI2O75521 394 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 RHOP08100 348 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 FXR2P51116 673 aaKnown RBP eCLIP23.11■■□□□ 1.29
PKD1-240ENST00000570253 HMGN5P82970 282 aaKnown RBP23.11■■□□□ 1.29
PKD1-240ENST00000570253 NT5DC1Q5TFE4 455 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 SNX29Q8TEQ0 813 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 DRC1Q96MC2 740 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 LLPHQ9BRT6 129 aaKnown RBP23.11■■□□□ 1.29
PKD1-240ENST00000570253 TCHPQ9BT92 498 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 DDX23Q9BUQ8 820 aaKnown RBP23.11■■□□□ 1.29
PKD1-240ENST00000570253 CXCL16Q9H2A7 254 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 LTB4R2Q9NPC1 389 aa23.11■■□□□ 1.29
PKD1-240ENST00000570253 DDX19AQ9NUU7 478 aaKnown RBP23.11■■□□□ 1.29
PKD1-240ENST00000570253 SMIM28A0A1B0GU29 152 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 ZNF197O14709 1029 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 SYN3O14994 580 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 EDN1P05305 212 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 PEX3P56589 373 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 ZNF852Q6ZMS4 543 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 TPRG1Q6ZUI0 275 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 DGLUCYQ7Z3D6 616 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 ZNF461Q8TAF7 563 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 ATRIPQ8WXE1 791 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 MCRS1Q96EZ8 462 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 GOLGA2P5Q9HBQ8 144 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 AVENQ9NQS1 362 aaPredicted RBP23.1■■□□□ 1.29
PKD1-240ENST00000570253 NCDNQ9UBB6 729 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 LIMCH1Q9UPQ0 1083 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 DNM3Q9UQ16 869 aa23.1■■□□□ 1.29
PKD1-240ENST00000570253 FANCMQ8IYD8 2048 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 ZNF292O60281 2723 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 PODXLO00592 558 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 LRRN2O75325 713 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 GLULP15104 373 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 BRCC3P46736 316 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 ARPP19P56211 112 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 OSTNP61366 133 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 ROR1Q01973 937 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 PDIA5Q14554 519 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 KRT79Q5XKE5 535 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 CCDC83Q8IWF9 413 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 ACAP3Q96P50 834 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 TMEM134Q9H6X4 195 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 KMT5AQ9NQR1 393 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 KCNG1Q9UIX4 513 aa23.09■■□□□ 1.29
PKD1-240ENST00000570253 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
PKD1-240ENST00000570253 PCDHGA2Q9Y5H1 932 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms