RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DARS2Q6PI48 645 aaKnown RBP8.18□□□□□ -1.1
CNOT1-222ENST00000570139 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 KCNK18Q7Z418 384 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 MYLK4Q86YV6 388 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-222ENST00000570139 CREG2Q8IUH2 290 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 PHYKPLQ8IUZ5 450 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 FAM156AQ8NDB6 213 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 AUTS2Q8WXX7 1259 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 MASTLQ96GX5 879 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 CD244Q9BZW8 370 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 DENND2AQ9ULE3 1009 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 COL4A1P02462 1669 aa8.18□□□□□ -1.1
CNOT1-222ENST00000570139 WASH4PA8MWX3 477 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
CNOT1-222ENST00000570139 GOLIM4O00461 696 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 PQBP1O60828 265 aaKnown RBP8.17□□□□□ -1.1
CNOT1-222ENST00000570139 TUSC2O75896 110 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 GDF11O95390 407 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 SRGNP10124 158 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 PDCP20941 246 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 ADORA1P30542 326 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 CACNB3P54284 484 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 KIAA0753Q2KHM9 967 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 MCMDC2Q4G0Z9 681 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 CT83Q5H943 113 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 CWC27Q6UX04 472 aaKnown RBP8.17□□□□□ -1.1
CNOT1-222ENST00000570139 ZPBP2Q6X784 338 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 SP8Q8IXZ3 490 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 ZGPATQ8N5A5 531 aaKnown RBP8.17□□□□□ -1.1
CNOT1-222ENST00000570139 SPATA5Q8NB90 893 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 TMEM52Q8NDY8 209 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 NLGN2Q8NFZ4 835 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 FERMT2Q96AC1 680 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 SCLT1Q96NL6 688 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 ANO3Q9BYT9 981 aa8.17□□□□□ -1.1
CNOT1-222ENST00000570139 FAM170BA6NMN3 283 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 F5H423 210 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-222ENST00000570139 H0YIN7 160 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 FOXP2O15409 715 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 RNF113AO15541 343 aaKnown RBP8.16□□□□□ -1.1
CNOT1-222ENST00000570139 BUB1BO60566 1050 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-222ENST00000570139 TAF5LO75529 589 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 TMEM253P0C7T8 217 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 MYBP10242 640 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 PTPN1P18031 435 aaKnown RBP8.16□□□□□ -1.1
CNOT1-222ENST00000570139 HALP42357 657 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 MCAMP43121 646 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 MCM2P49736 904 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 EPHA5P54756 1037 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 MAP3K12Q12852 859 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 SEMA5AQ13591 1074 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 LLGL1Q15334 1064 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 UBE3CQ15386 1083 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 PGS1Q32NB8 556 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 PLA2G4EQ3MJ16 856 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 CCDC88AQ3V6T2 1871 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 EMC4Q5J8M3 183 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 TIGD7Q6NT04 549 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-222ENST00000570139 CCDC62Q6P9F0 684 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 CCDC171Q6TFL3 1326 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 DEFB132Q7Z7B7 95 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 LZTR1Q8N653 840 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 PLEKHO2Q8TD55 490 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 CCDC138Q96M89 665 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 C7orf69Q9H7B7 122 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 RC3H2Q9HBD1 1191 aaKnown RBP8.16□□□□□ -1.1
CNOT1-222ENST00000570139 HMG20BQ9P0W2 317 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 STOML1Q9UBI4 398 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 TUBD1Q9UJT1 453 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 EDARQ9UNE0 448 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 ATP6V0A2Q9Y487 856 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 PPP2R3BQ9Y5P8 575 aa8.16□□□□□ -1.1
CNOT1-222ENST00000570139 CACNA1SQ13698 1873 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 RPAP1Q9BWH6 1393 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-222ENST00000570139 ZMYM6O95789 1325 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 SALL1Q9NSC2 1324 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 A0A1W2PQ45 241 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-222ENST00000570139 A0A1W2PQY0 241 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 HMX2A2RU54 273 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 TYRP1P17643 537 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 POLD1P28340 1107 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 HIBADHP31937 336 aaKnown RBP8.15□□□□□ -1.1
CNOT1-222ENST00000570139 HSPA4P34932 840 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 IL12RB1P42701 662 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 PHKA1P46020 1223 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 KRT32Q14532 448 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 CPSF6Q16630 551 aaKnown RBP eCLIP8.15□□□□□ -1.1
CNOT1-222ENST00000570139 MUM1Q2TAK8 710 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 ANO4Q32M45 955 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 ZMYM1Q5SVZ6 1142 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 CATSPEREQ5SY80 951 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 STEAP3Q658P3 488 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-222ENST00000570139 ALYREFQ86V81 257 aaKnown RBP8.15□□□□□ -1.1
CNOT1-222ENST00000570139 HSCBQ8IWL3 235 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 PRR18Q8N4B5 295 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 FBXL6Q8N531 539 aa8.15□□□□□ -1.1
CNOT1-222ENST00000570139 PHOSPHO1Q8TCT1 267 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms