RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PPP1R2P3Q6NXS1 205 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 MOB2Q70IA6 237 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 NOP9Q86U38 636 aaKnown RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 RPUSD2Q8IZ73 545 aaKnown RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ABRAQ8N0Z2 381 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 DEPTORQ8TB45 409 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 TAS1R2Q8TE23 839 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF526Q8TF50 670 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ATP8B4Q8TF62 1192 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 HDAC7Q8WUI4 952 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 SLC20A1Q8WUM9 679 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 PRPF31Q8WWY3 499 aaKnown RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CAVIN3Q969G5 261 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 TMEM143Q96AN5 459 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC127Q96BQ5 260 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 SAAL1Q96ER3 474 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 OTUD5Q96G74 571 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 FAXDC2Q96IV6 333 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 MS4A14Q96JA4 679 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CLMNQ96JQ2 1002 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 POP1Q99575 1024 aaKnown RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 FAM213AQ9BRX8 229 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 KIFC3Q9BVG8 833 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CARD9Q9H257 536 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 SMARCAD1Q9H4L7 1026 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 TXNRD2Q9NNW7 524 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 RBM12Q9NTZ6 932 aaKnown RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 PSD3Q9NYI0 1048 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 TAS2R14Q9NYV8 317 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 STIM2Q9P246 746 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 AGO2Q9UKV8 859 aaKnown RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ALG6Q9Y672 507 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 POLR2AP24928 1970 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MYH11P35749 1972 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 CNTNAP2Q9UHC6 1331 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 LOC285556D6RIA3 1793 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 A0A0G2JMZ2 1700 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MIF4GDA9UHW6 222 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 ZBTB42B2RXF5 422 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PGRMC1O00264 195 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 KCNK3O14649 394 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 DDX3YO15523 660 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 STRNO43815 780 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 CEP104O60308 925 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 HBP1O60381 514 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MSCO60682 206 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 TOM1L1O75674 476 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 GGPS1O95749 300 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 GLI1P08151 1106 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 FBXO45P0C2W1 286 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 UNGP13051 313 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 HSPA6P17066 643 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 ACO1P21399 889 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 TCF7P36402 384 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PEX5P50542 639 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 DRG2P55039 364 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 FKBP1BP68106 108 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 CCNA1P78396 465 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 FMO1Q01740 532 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 LAMC2Q13753 1193 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PLCB4Q15147 1175 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 LY6KQ17RY6 165 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 CLEC16AQ2KHT3 1053 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF792Q3KQV3 632 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 WDR44Q5JSH3 913 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF484Q5JVG2 852 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 TRIM72Q6ZMU5 477 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 TSHZ1Q6ZSZ6 1077 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MAATS1Q7Z4T9 603 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 DAAM2Q86T65 1068 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PALB2Q86YC2 1186 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 DHX37Q8IY37 1157 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 EFCAB13Q8IY85 973 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 IQCKQ8N0W5 287 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PPM1KQ8N3J5 372 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MREGQ8N565 214 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 C1orf131Q8NDD1 294 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 GPRC5AQ8NFJ5 357 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 FAM71BQ8TC56 605 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 SEC14L1Q92503 715 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 KAT5Q92993 513 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 EXOC4Q96A65 974 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 EMID1Q96A84 441 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 OPTNQ96CV9 577 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 ARHGEF26Q96DR7 871 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 SLC10A4Q96EP9 437 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 BICD1Q96G01 975 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 VCPIP1Q96JH7 1222 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 PKNOX2Q96KN3 472 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 KCNK17Q96T54 332 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 NAP1L3Q99457 506 aaPredicted RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 MMP19Q99542 508 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 ACO2Q99798 780 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 TARS2Q9BW92 718 aaKnown RBP5.78□□□□□ -1.48
SF3B3-213ENST00000569687 NFKBIZQ9BYH8 718 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 HAPLN2Q9GZV7 340 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC113Q9H0I3 377 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 THAP2Q9H0W7 228 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
SF3B3-213ENST00000569687 C2orf40Q9H1Z8 148 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms