RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.4■■□□□ 1.66
RAB40C-212ENST00000569575 P4HA2O15460 535 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 N4BP1O75113 896 aaKnown RBP25.4■■□□□ 1.66
RAB40C-212ENST00000569575 UPP2O95045 317 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 TNNI1P19237 187 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 CDK11BP21127 795 aaKnown RBP25.4■■□□□ 1.66
RAB40C-212ENST00000569575 RPL9P32969 192 aaKnown RBP25.4■■□□□ 1.66
RAB40C-212ENST00000569575 TCP11X2Q5H9J9 407 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 TDHQ8IZJ6 230 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 BEST2Q8NFU1 509 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 HELQQ8TDG4 1101 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 FAM212AQ96EL1 285 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 ANKRD36BP1Q96IX9 119 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 YME1L1Q96TA2 773 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 RC3H2Q9HBD1 1191 aaKnown RBP25.4■■□□□ 1.66
RAB40C-212ENST00000569575 SAMSN1Q9NSI8 373 aaKnown RBP25.4■■□□□ 1.66
RAB40C-212ENST00000569575 INTS13Q9NVM9 706 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.4■■□□□ 1.66
RAB40C-212ENST00000569575 ANK1P16157 1881 aa25.4■■□□□ 1.66
RAB40C-212ENST00000569575 TRIP11Q15643 1979 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 MEIS3P2A8K0S8 358 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 KCNJ18B7U540 433 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 PTGESO14684 152 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 TNNC2P02585 160 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 FGFR1P11362 822 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 TUSC3Q13454 348 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 KCNJ12Q14500 433 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 C9orf50Q5SZB4 431 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 CCDC127Q96BQ5 260 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 KIF12Q96FN5 646 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 EEF2KMTQ96G04 330 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 ZFP42Q96MM3 310 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 FAM193BQ96PV7 902 aaPredicted RBP25.39■■□□□ 1.66
RAB40C-212ENST00000569575 TMEM175Q9BSA9 504 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 PRO3102Q9H379 93 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 KLK14Q9P0G3 267 aa25.39■■□□□ 1.66
RAB40C-212ENST00000569575 PDCD11Q14690 1871 aaKnown RBP25.38■■□□□ 1.65
RAB40C-212ENST00000569575 FNDC1Q4ZHG4 1894 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-212ENST00000569575 TDRD15B5MCY1 1934 aaKnown RBP25.38■■□□□ 1.65
RAB40C-212ENST00000569575 TMEM191BP0C7N4 346 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 MTIF2P46199 727 aaKnown RBP25.38■■□□□ 1.65
RAB40C-212ENST00000569575 RNASELQ05823 741 aaKnown RBP25.38■■□□□ 1.65
RAB40C-212ENST00000569575 CETN1Q12798 172 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 MAN2A1Q16706 1144 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 JADE1Q6IE81 842 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 SP7Q8TDD2 431 aaPredicted RBP25.38■■□□□ 1.65
RAB40C-212ENST00000569575 SLC35C1Q96A29 364 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 TBC1D13Q9NVG8 400 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 LIMA1Q9UHB6 759 aaKnown RBP25.38■■□□□ 1.65
RAB40C-212ENST00000569575 ITGA11Q9UKX5 1188 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 RWDD3Q9Y3V2 267 aa25.38■■□□□ 1.65
RAB40C-212ENST00000569575 TBKBP1A7MCY6 615 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 MEFVO15553 781 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-212ENST00000569575 DLATP10515 647 aaKnown RBP25.37■■□□□ 1.65
RAB40C-212ENST00000569575 SCNN1GP51170 649 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 DSC1Q08554 894 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 LUZP1Q86V48 1076 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 TUBGCP2Q9BSJ2 902 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 TMEM8AQ9HCN3 771 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 AAASQ9NRG9 546 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 R3HCC1Q9Y3T6 440 aaKnown RBP25.37■■□□□ 1.65
RAB40C-212ENST00000569575 PCDHA11Q9Y5I1 949 aa25.37■■□□□ 1.65
RAB40C-212ENST00000569575 LRRIQ3A6PVS8 624 aaPredicted RBP25.36■■□□□ 1.65
RAB40C-212ENST00000569575 TLL1O43897 1013 aa25.36■■□□□ 1.65
RAB40C-212ENST00000569575 LRPAP1P30533 357 aa25.36■■□□□ 1.65
RAB40C-212ENST00000569575 BTG3Q14201 252 aaPredicted RBP25.36■■□□□ 1.65
RAB40C-212ENST00000569575 TCERG1LQ5VWI1 586 aa25.36■■□□□ 1.65
RAB40C-212ENST00000569575 KRT39Q6A163 491 aa25.36■■□□□ 1.65
RAB40C-212ENST00000569575 ZMAT2Q96NC0 199 aaKnown RBP25.36■■□□□ 1.65
RAB40C-212ENST00000569575 HSD3B7Q9H2F3 369 aa25.36■■□□□ 1.65
RAB40C-212ENST00000569575 STK39Q9UEW8 545 aa25.36■■□□□ 1.65
RAB40C-212ENST00000569575 INPP5FQ9Y2H2 1132 aa25.36■■□□□ 1.65
RAB40C-212ENST00000569575 ALDH2P05091 517 aa25.35■■□□□ 1.65
RAB40C-212ENST00000569575 IBSPP21815 317 aaPredicted RBP25.35■■□□□ 1.65
RAB40C-212ENST00000569575 TFAMQ00059 246 aaKnown RBP25.35■■□□□ 1.65
RAB40C-212ENST00000569575 NAB2Q15742 525 aa25.35■■□□□ 1.65
RAB40C-212ENST00000569575 RAB30Q15771 203 aa25.35■■□□□ 1.65
RAB40C-212ENST00000569575 UVSSAQ2YD98 709 aa25.35■■□□□ 1.65
RAB40C-212ENST00000569575 MIOSQ9NXC5 875 aa25.35■■□□□ 1.65
RAB40C-212ENST00000569575 DPP3Q9NY33 737 aa25.35■■□□□ 1.65
RAB40C-212ENST00000569575 PTPRSQ13332 1948 aa25.35■■□□□ 1.65
RAB40C-212ENST00000569575 GTPBP10A4D1E9 387 aaKnown RBP25.34■■□□□ 1.65
RAB40C-212ENST00000569575 POMCP01189 267 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 AFPP02771 609 aaKnown RBP25.34■■□□□ 1.65
RAB40C-212ENST00000569575 C4BPAP04003 597 aaKnown RBP25.34■■□□□ 1.65
RAB40C-212ENST00000569575 NFICP08651 508 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 LAG3P18627 525 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 PNPLA4P41247 253 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 KCNH2Q12809 1159 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 ZACNQ401N2 412 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 FILIP1LQ4L180 1135 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 DCAF17Q5H9S7 520 aaPredicted RBP25.34■■□□□ 1.65
RAB40C-212ENST00000569575 SMYD5Q6GMV2 418 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 C15orf39Q6ZRI6 1047 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 CREBRFQ8IUR6 639 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 EFCAB13Q8IY85 973 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 FIBCD1Q8N539 461 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 PLEKHO2Q8TD55 490 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 FAXDC2Q96IV6 333 aa25.34■■□□□ 1.65
RAB40C-212ENST00000569575 SAMD11Q96NU1 681 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms