RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 SLC39A2Q9NP94 309 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 TUBGCP4Q9UGJ1 667 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 KCNG1Q9UIX4 513 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 COG5Q9UP83 839 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 ATP6V1DQ9Y5K8 247 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 CITO14578 2027 aa9.85□□□□□ -0.83
GTF3C1-210ENST00000569394 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 GOLGA6L4A6NEF3 574 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 LACTBL1A8MY62 500 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 CLIC2O15247 247 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 CLASP2O75122 1294 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ZMYND10O75800 440 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 GLP2RO95838 553 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 URODP06132 367 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 EPCAMP16422 314 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 PROZP22891 400 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 KLRC2P26717 231 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 TIE1P35590 1138 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ANP32AP39687 249 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 SYKP43405 635 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 GTF2BQ00403 316 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 AMPD3Q01432 767 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 DSC1Q08554 894 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ADAM15Q13444 863 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 BMS1Q14692 1282 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 PTPN14Q15678 1187 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 SLC10A6Q3KNW5 377 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 FUT10Q6P4F1 479 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ZPBP2Q6X784 338 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 MRPL43Q8N983 215 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 FEZF2Q8TBJ5 459 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ADAMTS19Q8TE59 1207 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 PAGE5Q96GU1 130 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 SNX27Q96L92 541 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ACCSQ96QU6 501 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 TRIM9Q9C026 710 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 SCAND2PQ9GZW5 306 aaPredicted RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 TNMDQ9H2S6 317 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 RPF1Q9H9Y2 349 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 NGRNQ9NPE2 291 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 MRPL17Q9NRX2 175 aaKnown RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 TOPORSQ9NS56 1045 aaPredicted RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 KBTBD4Q9NVX7 518 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 CLEC1BQ9P126 229 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ADAM28Q9UKQ2 775 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 LZTS1Q9Y250 596 aa9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 MORC2Q9Y6X9 1032 aaPredicted RBP9.84□□□□□ -0.83
GTF3C1-210ENST00000569394 ACTN4O43707 911 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 B3GAT3O94766 335 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 CNPP09543 421 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 CTSAP10619 480 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 BMP1P13497 986 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 COL9A1P20849 921 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 CMA1P23946 247 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 GLUD2P49448 558 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 ARPP19P56211 112 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 PPP2R3AQ06190 1150 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 MCL1Q07820 350 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 NAB2Q15742 525 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 ENOX2Q16206 610 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 DUSP6Q16828 381 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 AAK1Q2M2I8 961 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 RTP2Q5QGT7 225 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 RARS2Q5T160 578 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 L1TD1Q5T7N2 865 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 MAP4K3Q8IVH8 894 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 EFHBQ8N7U6 833 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 RDH13Q8NBN7 331 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 C3orf58Q8NDZ4 430 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 ERCC4Q92889 916 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 KLHL5Q96PQ7 755 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 PPP1R10Q96QC0 940 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 UHRF1Q96T88 793 aaPredicted RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 FAM213AQ9BRX8 229 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 LRRC27Q9C0I9 530 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 CD207Q9UJ71 328 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 AGO2Q9UKV8 859 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 HCFC2Q9Y5Z7 792 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 SPTBN5Q9NRC6 3674 aaKnown RBP9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 TRANK1O15050 2925 aa9.83□□□□□ -0.84
GTF3C1-210ENST00000569394 GRXCR2A6NFK2 248 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 PODXLO00592 558 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 OGTO15294 1046 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 INPPL1O15357 1258 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 SOD2P04179 222 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 NFICP08651 508 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 CLTAP09496 248 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 TKTP29401 623 aaKnown RBP9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 SSTR3P32745 418 aaPredicted RBP9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 LEXMQ3ZCV2 418 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 FAM26FQ5R3K3 315 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 LMBRD2Q68DH5 695 aaPredicted RBP9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 JADE1Q6IE81 842 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 TMC5Q6UXY8 1006 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 C7orf25Q9BPX7 421 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 CBWD1Q9BRT8 395 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 HERC2P3Q9BVR0 1158 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 EMILIN2Q9BXX0 1053 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 CUEDC2Q9H467 287 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms