RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 XDHP47989 1333 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 GRXCR1A8MXD5 290 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 FZD9O00144 591 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 GABRDO14764 452 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 CYP27B1O15528 508 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCDHGA12O60330 932 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 IPO13O94829 963 aaKnown RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 GNAT2P19087 354 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 MCAMP43121 646 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 MAN2A2P49641 1150 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZXDAP98168 799 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 SLC25A3Q00325 362 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 ITKQ08881 620 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 MALLQ13021 153 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 CRHR2Q13324 411 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 SEPT2Q15019 361 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 ANO4Q32M45 955 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 MFSD14BQ5SR56 506 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 SYDE2Q5VT97 1194 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 MBNL2Q5VZF2 373 aaKnown RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 OR52N2Q8NGI0 321 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 OR2I1PQ8NGU4 316 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 CACTINQ8WUQ7 758 aaKnown RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZNF480Q8WV37 535 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 MTMR8Q96EF0 704 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PAWRQ96IZ0 340 aaKnown RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PLEKHG4BQ96PX9 1271 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 CDC5LQ99459 802 aaKnown RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 CPPED1Q9BRF8 314 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 KCNH6Q9H252 994 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 EPC1Q9H2F5 836 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 GREM2Q9H772 168 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZNF703Q9H7S9 590 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCDHGA9Q9Y5G4 932 aaKnown RBP4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCDHGA8Q9Y5G5 932 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCDHGA7Q9Y5G6 932 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCDHGA6Q9Y5G7 932 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCDHGA3Q9Y5H0 932 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 RTEL1-TNFRSF6BF6WH68 1400 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 GCC2Q8IWJ2 1684 aa4.44□□□□□ -1.7
HMGB1P6-201ENST00000569046 CCDC141Q6ZP82 1450 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 TET3O43151 1660 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 KDM5AP29375 1690 aaKnown RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 SHPRHQ149N8 1683 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 hCG_2014768A0A024R1R8 64 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 PHF2O75151 1096 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 GASTP01350 101 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 C6P13671 934 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 GSPT1P15170 499 aaKnown RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 SLC5A3P53794 718 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 IGBP1P78318 339 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 CNGB1Q14028 1251 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 TOB2Q14106 344 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 MUM1L1Q5H9M0 696 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 NAIF1Q69YI7 327 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 PGM2L1Q6PCE3 622 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 DOK3Q7L591 496 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 GPRIN1Q7Z2K8 1008 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 FAM83AQ86UY5 434 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 TRMT2AQ8IZ69 625 aaKnown RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 PPM1NQ8N819 430 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 SLC35B2Q8TB61 432 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 JADE3Q92613 823 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 DDX17Q92841 729 aaKnown RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 FAXDC2Q96IV6 333 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 PDCD2LQ9BRP1 358 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 RBM12Q9NTZ6 932 aaKnown RBP4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 KLHL42Q9P2K6 505 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 TUBD1Q9UJT1 453 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 SIK3Q9Y2K2 1263 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 EID1Q9Y6B2 187 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 SETBP1Q9Y6X0 1596 aa4.43□□□□□ -1.7
HMGB1P6-201ENST00000569046 ATRNL1Q5VV63 1379 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 JCADQ9P266 1359 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 SLIT1O75093 1534 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 EHBP1L1Q8N3D4 1523 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 NPIPB8E9PQR5 432 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 FAM20BO75063 409 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 TSPY4P0CV99 314 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 TSPY10P0CW01 314 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 MYBL2P10244 700 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 RBP3P10745 1247 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 TACR2P21452 398 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 CRHR1P34998 444 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 PTPN7P35236 360 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 SREBF1P36956 1147 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 SLC6A9P48067 706 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 PTH1RQ03431 593 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 IDI1Q13907 227 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 NOMO1Q15155 1222 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCBP2Q15366 365 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 CLUL1Q15846 466 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 DCAF17Q5H9S7 520 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 FNDC7Q5VTL7 733 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 SYT12Q8IV01 421 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 AMOTL1Q8IY63 956 aa4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 RPUSD2Q8IZ73 545 aaKnown RBP4.42□□□□□ -1.7
HMGB1P6-201ENST00000569046 OR7D4Q8NG98 312 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms