RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 PMS2CLQ68D20 193 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 CYP2U1Q7Z449 544 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 CAMKK1Q8N5S9 505 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 CNNM3Q8NE01 707 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 TTC8Q8TAM2 541 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 RSPRY1Q96DX4 576 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 HHIPQ96QV1 700 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 PAAF1Q9BRP4 392 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 ZNF577Q9BSK1 485 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 SUCLA2Q9P2R7 463 aaPredicted RBP12.56□□□□□ -0.4
CDH3-208ENST00000569036 SAMM50Q9Y512 469 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 HES2Q9Y543 173 aa12.56□□□□□ -0.4
CDH3-208ENST00000569036 TEP1Q99973 2627 aaKnown RBP12.56□□□□□ -0.4
CDH3-208ENST00000569036 hCG_1642624A0A1W2PR95 340 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 ZNF197O14709 1029 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 GBP1P32455 592 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 LMAN2Q12907 356 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 AAMPQ13685 434 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 MTERF2Q49AM1 385 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 YAF2Q8IY57 180 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 SRBD1Q8N5C6 995 aaKnown RBP12.55□□□□□ -0.4
CDH3-208ENST00000569036 GSTCDQ8NEC7 633 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 ZSCAN18Q8TBC5 510 aaPredicted RBP12.55□□□□□ -0.4
CDH3-208ENST00000569036 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
CDH3-208ENST00000569036 CLMPQ9H6B4 373 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 MINDY3Q9H8M7 445 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 TBC1D22BQ9NU19 505 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 EVLQ9UI08 416 aaPredicted RBP12.55□□□□□ -0.4
CDH3-208ENST00000569036 PTPRBP23467 1997 aa12.55□□□□□ -0.4
CDH3-208ENST00000569036 TNRC6BQ9UPQ9 1833 aaKnown RBP12.55□□□□□ -0.4
CDH3-208ENST00000569036 A0A087WV48 116 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 ARHGEF37A1IGU5 675 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 ERICH2A1L162 156 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 ATG13O75143 517 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 MOSPD3O75425 235 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 KIF4AO95239 1232 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
CDH3-208ENST00000569036 LRG1P02750 347 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 PDZD4Q76G19 769 aaPredicted RBP12.54□□□□□ -0.4
CDH3-208ENST00000569036 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 CMTR1Q8N1G2 835 aaKnown RBP12.54□□□□□ -0.4
CDH3-208ENST00000569036 CTCFLQ8NI51 663 aaPredicted RBP12.54□□□□□ -0.4
CDH3-208ENST00000569036 MAP3K14Q99558 947 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 DSCC1Q9BVC3 393 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 GTSE1Q9NYZ3 720 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 ADAMTS9Q9P2N4 1935 aa12.54□□□□□ -0.4
CDH3-208ENST00000569036 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 WDR64B1ANS9 1081 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 ENGP17813 658 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 SRSF1Q07955 248 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDH3-208ENST00000569036 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 GRIK3Q13003 919 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 TRIM61Q5EBN2 209 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 ADAMTS14Q8WXS8 1223 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 PIGKQ92643 395 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
CDH3-208ENST00000569036 INVSQ9Y283 1065 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 GIT1Q9Y2X7 761 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
CDH3-208ENST00000569036 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 DDAH1O94760 285 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 GJA1P17302 382 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 GSE1Q14687 1217 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 ZNF654Q8IZM8 581 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 LSM14AQ8ND56 463 aaKnown RBP12.52□□□□□ -0.41
CDH3-208ENST00000569036 E2F7Q96AV8 911 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 NUSAP1Q9BXS6 441 aaKnown RBP12.52□□□□□ -0.41
CDH3-208ENST00000569036 NIFKQ9BYG3 293 aaKnown RBP12.52□□□□□ -0.41
CDH3-208ENST00000569036 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
CDH3-208ENST00000569036 RIC8AQ9NPQ8 531 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 DISC1Q9NRI5 854 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 DAXXQ9UER7 740 aaPredicted RBP12.52□□□□□ -0.41
CDH3-208ENST00000569036 EBF1Q9UH73 591 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 PTPRQQ9UMZ3 2332 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 KIAA1549LQ6ZVL6 1849 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.41
CDH3-208ENST00000569036 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 CASTOR2A6NHX0 329 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 MAFO75444 373 aaPredicted RBP12.51□□□□□ -0.41
CDH3-208ENST00000569036 APBB3O95704 486 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 SDSP20132 328 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 BCKDHBP21953 392 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 ABCG1P45844 678 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 PDE1AP54750 535 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 SETQ01105 290 aaPredicted RBP12.51□□□□□ -0.41
CDH3-208ENST00000569036 TRDNQ13061 729 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 CYP4A22Q5TCH4 519 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 FSTL4Q6MZW2 842 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
CDH3-208ENST00000569036 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms